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RHD1 phosphoenolpyruvate-dependent sugar phosphotransferase [ Scheffersomyces stipitis CBS 6054 ]

Gene ID: 4850895, updated on 21-Dec-2023

Summary

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Gene symbol
RHD1
Gene description
phosphoenolpyruvate-dependent sugar phosphotransferase
Locus tag
PICST_51290
Gene type
protein coding
RNA name
phosphoenolpyruvate-dependent sugar phosphotransferase
RefSeq status
PROVISIONAL
Organism
Scheffersomyces stipitis CBS 6054 (strain: CBS 6054)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Scheffersomyces
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Genomic context

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See RHD1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Sequence:
Chromosome: 1; NC_009068.1 (356987..359440)

Chromosome 1 - NC_009068.1Genomic Context describing neighboring genes Neighboring gene N-terminus highly conserved Neighboring gene Golgi alpha-1,2- mannosyltransferase Neighboring gene subunit of activation mediator subcomplex of RNA polymerase II holoenzyme Neighboring gene zinc-regulated protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009068.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. Jeffries TW, et al. Nat Biotechnol, 2007 Mar. PMID 17334359
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
phosphoenolpyruvate-dependent sugar phosphotransferase
XP_001387307.2
  • phosphoenolpyruvate-dependent sugar phosphotransferase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009068.1 Reference assembly

    Range
    356987..359440
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001387270.1 → XP_001387307.2  phosphoenolpyruvate-dependent sugar phosphotransferase, partial [Scheffersomyces stipitis CBS 6054]

    See identical proteins and their annotated locations for XP_001387307.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A3GF46
    Conserved Domains (1) summary
    pfam12141
    Location:136 → 533
    DUF3589; Protein of unknown function (DUF3589)
Nucleotide Protein
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