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ATXN7 ataxin 7 [ Canis lupus familiaris (dog) ]

Gene ID: 484701, updated on 17-Aug-2024

Summary

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Official Symbol
ATXN7provided by VGNC
Official Full Name
ataxin 7provided by VGNC
Primary source
VGNC:VGNC:38303
See related
Ensembl:ENSCAFG00845013551
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See ATXN7 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
17
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (27463951..27603969, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (27151293..27291175, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (27415760..27555632, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (26960721..27100621, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (27311169..27450739, complement)

Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119864583 Neighboring gene uncharacterized LOC119864668 Neighboring gene proteasome 26S subunit, non-ATPase 6 Neighboring gene THO complex subunit 7 Neighboring gene chromosome 20 C3orf49 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Assignment of the calcium channel, voltage-dependent, P/Q type, alpha 1A subunit gene (CACNA1A), and the ataxin 7 gene (ATXN7) to canine chromosome 20 by fluorescence in situ hybridization and confirmation by radiation hybrid mapping. Kuiper H, et al. Cytogenet Genome Res, 2005. PMID 16097083

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
ataxin-7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051824.1 Reference ROS_Cfam_1.0

    Range
    27463951..27603969 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038427247.1 → XP_038283175.1  ataxin-7 isoform X1

    UniProtKB/TrEMBL
    A0A8P0NYJ9
    Conserved Domains (2) summary
    PHA03247
    Location:373 → 489
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:334 → 394
    SCA7; zinc-binding domain

  2. XM_038427248.1 → XP_038283176.1  ataxin-7 isoform X1

    UniProtKB/TrEMBL
    A0A8P0NYJ9
    Conserved Domains (2) summary
    PHA03247
    Location:373 → 489
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:334 → 394
    SCA7; zinc-binding domain

  3. XM_038427245.1 → XP_038283173.1  ataxin-7 isoform X1

    UniProtKB/TrEMBL
    A0A8P0NYJ9
    Conserved Domains (2) summary
    PHA03247
    Location:373 → 489
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:334 → 394
    SCA7; zinc-binding domain

  4. XM_038427244.1 → XP_038283172.1  ataxin-7 isoform X1

    UniProtKB/TrEMBL
    A0A8P0NYJ9
    Conserved Domains (2) summary
    PHA03247
    Location:373 → 489
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:334 → 394
    SCA7; zinc-binding domain

  5. XM_038427249.1 → XP_038283177.1  ataxin-7 isoform X2

    UniProtKB/TrEMBL
    A0A8I3NSZ8, A0A8P0NYJ9
    Related
    ENSCAFP00845018971.1, ENSCAFT00845024153.1
    Conserved Domains (2) summary
    PHA03247
    Location:373 → 489
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:334 → 394
    SCA7; zinc-binding domain

  6. XM_038427250.1 → XP_038283178.1  ataxin-7 isoform X3

    UniProtKB/TrEMBL
    A0A8C0NAP8, A0A8I3NSR9
    Conserved Domains (2) summary
    PHA03247
    Location:240 → 356
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:201 → 261
    SCA7; zinc-binding domain

  7. XM_038427251.1 → XP_038283179.1  ataxin-7 isoform X4

    UniProtKB/TrEMBL
    A0A8C0NAP8, A0A8I3NSR9
    Related
    ENSCAFP00845019049.1, ENSCAFT00845024246.1
    Conserved Domains (2) summary
    PHA03247
    Location:228 → 344
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:189 → 249
    SCA7; zinc-binding domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049280.1 Alternate UMICH_Zoey_3.1

    Range
    26960721..27100621 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038502974.1 → XP_038358902.1  ataxin-7 isoform X1

    Conserved Domains (2) summary
    PHA03247
    Location:374 → 490
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:335 → 395
    SCA7; zinc-binding domain

  2. XM_038502973.1 → XP_038358901.1  ataxin-7 isoform X1

    Conserved Domains (2) summary
    PHA03247
    Location:374 → 490
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:335 → 395
    SCA7; zinc-binding domain

  3. XM_038502972.1 → XP_038358900.1  ataxin-7 isoform X1

    Conserved Domains (2) summary
    PHA03247
    Location:374 → 490
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:335 → 395
    SCA7; zinc-binding domain

  4. XM_038502971.1 → XP_038358899.1  ataxin-7 isoform X1

    Conserved Domains (2) summary
    PHA03247
    Location:374 → 490
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:335 → 395
    SCA7; zinc-binding domain

  5. XM_038502975.1 → XP_038358903.1  ataxin-7 isoform X2

    Conserved Domains (2) summary
    PHA03247
    Location:374 → 490
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:335 → 395
    SCA7; zinc-binding domain

  6. XM_038502976.1 → XP_038358904.1  ataxin-7 isoform X3

    Conserved Domains (2) summary
    PHA03247
    Location:240 → 356
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:201 → 261
    SCA7; zinc-binding domain

  7. XM_038502977.1 → XP_038358905.1  ataxin-7 isoform X4

    Conserved Domains (2) summary
    PHA03247
    Location:228 → 344
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:189 → 249
    SCA7; zinc-binding domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

    Range
    27311169..27450739 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038630072.1 → XP_038486000.1  ataxin-7 isoform X1

    Conserved Domains (2) summary
    PHA03247
    Location:374 → 490
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:335 → 395
    SCA7; zinc-binding domain

  2. XM_038630071.1 → XP_038485999.1  ataxin-7 isoform X1

    Conserved Domains (2) summary
    PHA03247
    Location:374 → 490
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:335 → 395
    SCA7; zinc-binding domain

  3. XM_038630070.1 → XP_038485998.1  ataxin-7 isoform X1

    Conserved Domains (2) summary
    PHA03247
    Location:374 → 490
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:335 → 395
    SCA7; zinc-binding domain

  4. XM_038630069.1 → XP_038485997.1  ataxin-7 isoform X1

    Conserved Domains (2) summary
    PHA03247
    Location:374 → 490
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:335 → 395
    SCA7; zinc-binding domain

  5. XM_038630073.1 → XP_038486001.1  ataxin-7 isoform X2

    Conserved Domains (2) summary
    PHA03247
    Location:374 → 490
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:335 → 395
    SCA7; zinc-binding domain

  6. XM_038630074.1 → XP_038486002.1  ataxin-7 isoform X3

    Conserved Domains (2) summary
    PHA03247
    Location:240 → 356
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:201 → 261
    SCA7; zinc-binding domain

  7. XM_038630075.1 → XP_038486003.1  ataxin-7 isoform X4

    Conserved Domains (2) summary
    PHA03247
    Location:228 → 344
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:189 → 249
    SCA7; zinc-binding domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

    Range
    27415760..27555632 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038565937.1 → XP_038421865.1  ataxin-7 isoform X1

    UniProtKB/TrEMBL
    A0A8P0NYJ9

  2. XM_038565938.1 → XP_038421866.1  ataxin-7 isoform X1

    UniProtKB/TrEMBL
    A0A8P0NYJ9

  3. XM_038565936.1 → XP_038421864.1  ataxin-7 isoform X1

    UniProtKB/TrEMBL
    A0A8P0NYJ9

  4. XM_038565935.1 → XP_038421863.1  ataxin-7 isoform X1

    UniProtKB/TrEMBL
    A0A8P0NYJ9

  5. XM_038565934.1 → XP_038421862.1  ataxin-7 isoform X1

    UniProtKB/TrEMBL
    A0A8P0NYJ9

  6. XM_038565939.1 → XP_038421867.1  ataxin-7 isoform X2

    UniProtKB/TrEMBL
    A0A8P0NYJ9

  7. XM_038565940.1 → XP_038421868.1  ataxin-7 isoform X3

    UniProtKB/TrEMBL
    A0A8C0NAP8, A0A8I3NSR9
    Conserved Domains (2) summary
    PHA03247
    Location:240 → 356
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:201 → 261
    SCA7; zinc-binding domain

  8. XM_038565941.1 → XP_038421869.1  ataxin-7 isoform X4

    UniProtKB/TrEMBL
    A0A8C0NAP8, A0A8I3NSR9
    Conserved Domains (2) summary
    PHA03247
    Location:228 → 344
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:189 → 249
    SCA7; zinc-binding domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    27151293..27291175 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038455365.1 → XP_038311293.1  ataxin-7 isoform X1

    UniProtKB/TrEMBL
    A0A8P0NYJ9
    Conserved Domains (2) summary
    PHA03247
    Location:374 → 490
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:335 → 395
    SCA7; zinc-binding domain

  2. XM_038455366.1 → XP_038311294.1  ataxin-7 isoform X1

    UniProtKB/TrEMBL
    A0A8P0NYJ9
    Conserved Domains (2) summary
    PHA03247
    Location:374 → 490
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:335 → 395
    SCA7; zinc-binding domain

  3. XM_022406487.2 → XP_022262195.1  ataxin-7 isoform X1

    UniProtKB/TrEMBL
    A0A8P0NYJ9
    Conserved Domains (2) summary
    PHA03247
    Location:374 → 490
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:335 → 395
    SCA7; zinc-binding domain

  4. XM_022406486.2 → XP_022262194.1  ataxin-7 isoform X1

    UniProtKB/TrEMBL
    A0A8P0NYJ9
    Conserved Domains (2) summary
    PHA03247
    Location:374 → 490
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:335 → 395
    SCA7; zinc-binding domain

  5. XM_022406485.2 → XP_022262193.1  ataxin-7 isoform X1

    UniProtKB/TrEMBL
    A0A8P0NYJ9
    Conserved Domains (2) summary
    PHA03247
    Location:374 → 490
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:335 → 395
    SCA7; zinc-binding domain

  6. XM_843193.6 → XP_848286.1  ataxin-7 isoform X2

    UniProtKB/TrEMBL
    A0A8C0NKC3, A0A8C0QZ31, A0A8P0NYJ9, A0A8P0SVT6
    Conserved Domains (2) summary
    PHA03247
    Location:374 → 490
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:335 → 395
    SCA7; zinc-binding domain

  7. XM_022406489.2 → XP_022262197.1  ataxin-7 isoform X3

    UniProtKB/TrEMBL
    A0A8C0NAP8, A0A8I3NSR9
    Conserved Domains (2) summary
    PHA03247
    Location:240 → 356
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:201 → 261
    SCA7; zinc-binding domain

  8. XM_022406490.2 → XP_022262198.1  ataxin-7 isoform X4

    UniProtKB/TrEMBL
    A0A8C0NAP8, A0A8I3NSR9
    Conserved Domains (2) summary
    PHA03247
    Location:228 → 344
    PHA03247; large tegument protein UL36; Provisional
    pfam08313
    Location:189 → 249
    SCA7; zinc-binding domain
Nucleotide Protein
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