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STX7 syntaxin 7 [ Canis lupus familiaris (dog) ]

Gene ID: 483987, updated on 17-Aug-2024

Summary

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Official Symbol
STX7provided by VGNC
Official Full Name
syntaxin 7provided by VGNC
Primary source
VGNC:VGNC:46958
See related
Ensembl:ENSCAFG00845004632
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See STX7 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
14
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (25455483..25518496, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (26531632..26594249, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 1 NC_049222.1 (25663904..25726563, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (25501729..25564656, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (25400189..25462818, complement)

Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene monooxygenase DBH like 1 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC119870730 Neighboring gene trace amine-associated receptor 6-like Neighboring gene trace amine associated receptor 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle docking IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SNARE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syntaxin-7
Names
syntaxin-7-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051805.1 Reference ROS_Cfam_1.0

    Range
    25455483..25518496 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038654151.1 → XP_038510079.1  syntaxin-7 isoform X1

    UniProtKB/TrEMBL
    A0A8C0MNL0
    Conserved Domains (2) summary
    cd15875
    Location:178 → 237
    SNARE_syntaxin7; SNARE motif of syntaxin 7
    pfam14523
    Location:41 → 129
    Syntaxin_2; Syntaxin-like protein

  2. XM_038654154.1 → XP_038510082.1  syntaxin-7 isoform X3

    UniProtKB/TrEMBL
    A0A8C0MNL0
    Conserved Domains (2) summary
    cd15875
    Location:178 → 237
    SNARE_syntaxin7; SNARE motif of syntaxin 7
    pfam14523
    Location:41 → 129
    Syntaxin_2; Syntaxin-like protein

  3. XM_038654153.1 → XP_038510081.1  syntaxin-7 isoform X2

    UniProtKB/TrEMBL
    A0A8C0MNL0, A0A8C0SKB8, A0A8I3RTN0
    Related
    ENSCAFP00845006519.1, ENSCAFT00845008287.1
    Conserved Domains (2) summary
    cd15875
    Location:168 → 227
    SNARE_syntaxin7; SNARE motif of syntaxin 7
    pfam14523
    Location:18 → 119
    Syntaxin_2; Syntaxin-like protein

  4. XM_038654152.1 → XP_038510080.1  syntaxin-7 isoform X2

    UniProtKB/TrEMBL
    A0A8C0MNL0, A0A8C0SKB8, A0A8I3RTN0
    Conserved Domains (2) summary
    cd15875
    Location:168 → 227
    SNARE_syntaxin7; SNARE motif of syntaxin 7
    pfam14523
    Location:18 → 119
    Syntaxin_2; Syntaxin-like protein

  5. XM_038654155.1 → XP_038510083.1  syntaxin-7 isoform X4

    UniProtKB/TrEMBL
    A0A8C0MC62, A0A8I3MNH2
    Related
    ENSCAFP00845006527.1, ENSCAFT00845008296.1
    Conserved Domains (2) summary
    cd15875
    Location:178 → 237
    SNARE_syntaxin7; SNARE motif of syntaxin 7
    pfam14523
    Location:41 → 129
    Syntaxin_2; Syntaxin-like protein

  6. XM_038654156.1 → XP_038510084.1  syntaxin-7 isoform X6

    UniProtKB/TrEMBL
    A0A8C0L6L3, A0A8C0MFT5, A0A8C0YXM9, A0A8I3MUA1, A0A8I3MV58
    Related
    ENSCAFP00845006535.1, ENSCAFT00845008305.1
    Conserved Domains (2) summary
    cd15875
    Location:168 → 227
    SNARE_syntaxin7; SNARE motif of syntaxin 7
    pfam14523
    Location:18 → 119
    Syntaxin_2; Syntaxin-like protein

  7. XM_038654157.1 → XP_038510085.1  syntaxin-7 isoform X5

    Conserved Domains (2) summary
    pfam14523
    Location:41 → 129
    Syntaxin_2; Syntaxin-like protein
    cl22856
    Location:178 → 213
    SNARE; SNARE motif

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049261.1 Alternate UMICH_Zoey_3.1

    Range
    25501729..25564656 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038465417.1 → XP_038321345.1  syntaxin-7 isoform X1

    Conserved Domains (2) summary
    cd15875
    Location:178 → 237
    SNARE_syntaxin7; SNARE motif of syntaxin 7
    pfam14523
    Location:41 → 129
    Syntaxin_2; Syntaxin-like protein

  2. XM_038465420.1 → XP_038321348.1  syntaxin-7 isoform X3

    Conserved Domains (2) summary
    cd15875
    Location:178 → 237
    SNARE_syntaxin7; SNARE motif of syntaxin 7
    pfam14523
    Location:41 → 129
    Syntaxin_2; Syntaxin-like protein

  3. XM_038465419.1 → XP_038321347.1  syntaxin-7 isoform X2

    Conserved Domains (2) summary
    cd15875
    Location:168 → 227
    SNARE_syntaxin7; SNARE motif of syntaxin 7
    pfam14523
    Location:18 → 119
    Syntaxin_2; Syntaxin-like protein

  4. XM_038465418.1 → XP_038321346.1  syntaxin-7 isoform X2

    Conserved Domains (2) summary
    cd15875
    Location:168 → 227
    SNARE_syntaxin7; SNARE motif of syntaxin 7
    pfam14523
    Location:18 → 119
    Syntaxin_2; Syntaxin-like protein

  5. XM_038465421.1 → XP_038321349.1  syntaxin-7 isoform X4

    Conserved Domains (2) summary
    cd15875
    Location:178 → 237
    SNARE_syntaxin7; SNARE motif of syntaxin 7
    pfam14523
    Location:41 → 129
    Syntaxin_2; Syntaxin-like protein

  6. XM_038465423.1 → XP_038321351.1  syntaxin-7 isoform X6

    Conserved Domains (2) summary
    cd15875
    Location:168 → 227
    SNARE_syntaxin7; SNARE motif of syntaxin 7
    pfam14523
    Location:18 → 119
    Syntaxin_2; Syntaxin-like protein

  7. XM_038465424.1 → XP_038321352.1  syntaxin-7 isoform X5

    Conserved Domains (2) summary
    pfam14523
    Location:41 → 129
    Syntaxin_2; Syntaxin-like protein
    cl22856
    Location:178 → 213
    SNARE; SNARE motif

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

    Range
    25400189..25462818 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038590333.1 → XP_038446261.1  syntaxin-7 isoform X7

  2. XM_038590334.1 → XP_038446262.1  syntaxin-7 isoform X6

    Conserved Domains (2) summary
    cd15875
    Location:168 → 227
    SNARE_syntaxin7; SNARE motif of syntaxin 7
    pfam14523
    Location:18 → 119
    Syntaxin_2; Syntaxin-like protein

RNA

  1. XR_005388085.1 RNA Sequence

  2. XR_005388084.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049222.1 Alternate UU_Cfam_GSD_1.0

    Range
    25663904..25726563 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038526032.1 → XP_038381960.1  syntaxin-7 isoform X8

    UniProtKB/TrEMBL
    A0A8C0LC71, A0A8C0MCE1, A0A8I3MY30

  2. XM_038526033.1 → XP_038381961.1  syntaxin-7 isoform X6

    UniProtKB/TrEMBL
    A0A8C0L6L3, A0A8C0MFT5, A0A8C0YXM9, A0A8I3MUA1, A0A8I3MV58
    Conserved Domains (2) summary
    cd15875
    Location:168 → 227
    SNARE_syntaxin7; SNARE motif of syntaxin 7
    pfam14523
    Location:18 → 119
    Syntaxin_2; Syntaxin-like protein

RNA

  1. XR_005353503.1 RNA Sequence

  2. XR_005353502.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    26531632..26594249 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022417138.2 → XP_022272846.1  syntaxin-7 isoform X1

    UniProtKB/TrEMBL
    A0A8C0MNL0
    Conserved Domains (2) summary
    cd15875
    Location:178 → 237
    SNARE_syntaxin7; SNARE motif of syntaxin 7
    pfam14523
    Location:41 → 129
    Syntaxin_2; Syntaxin-like protein

  2. XM_022417149.2 → XP_022272857.1  syntaxin-7 isoform X3

    UniProtKB/TrEMBL
    A0A8C0MNL0
    Conserved Domains (2) summary
    cd15875
    Location:178 → 237
    SNARE_syntaxin7; SNARE motif of syntaxin 7
    pfam14523
    Location:41 → 129
    Syntaxin_2; Syntaxin-like protein

  3. XM_022417146.2 → XP_022272854.1  syntaxin-7 isoform X2

    UniProtKB/TrEMBL
    A0A8C0MNL0, A0A8C0SKB8, A0A8I3RTN0
    Conserved Domains (2) summary
    cd15875
    Location:168 → 227
    SNARE_syntaxin7; SNARE motif of syntaxin 7
    pfam14523
    Location:18 → 119
    Syntaxin_2; Syntaxin-like protein

  4. XM_022417144.2 → XP_022272852.1  syntaxin-7 isoform X2

    UniProtKB/TrEMBL
    A0A8C0MNL0, A0A8C0SKB8, A0A8I3RTN0
    Conserved Domains (2) summary
    cd15875
    Location:168 → 227
    SNARE_syntaxin7; SNARE motif of syntaxin 7
    pfam14523
    Location:18 → 119
    Syntaxin_2; Syntaxin-like protein

  5. XM_022417151.2 → XP_022272859.1  syntaxin-7 isoform X4

    UniProtKB/TrEMBL
    A0A8C0MC62, A0A8I3MNH2
    Conserved Domains (2) summary
    cd15875
    Location:178 → 237
    SNARE_syntaxin7; SNARE motif of syntaxin 7
    pfam14523
    Location:41 → 129
    Syntaxin_2; Syntaxin-like protein

  6. XM_854089.5 → XP_859182.1  syntaxin-7 isoform X6

    UniProtKB/TrEMBL
    A0A8C0L6L3, A0A8C0MFT5, A0A8C0YXM9, A0A8I3MUA1, A0A8I3MV58
    Conserved Domains (2) summary
    cd15875
    Location:168 → 227
    SNARE_syntaxin7; SNARE motif of syntaxin 7
    pfam14523
    Location:18 → 119
    Syntaxin_2; Syntaxin-like protein

  7. XM_038491163.1 → XP_038347091.1  syntaxin-7 isoform X5

    Conserved Domains (2) summary
    pfam14523
    Location:41 → 129
    Syntaxin_2; Syntaxin-like protein
    cl22856
    Location:178 → 213
    SNARE; SNARE motif
Nucleotide Protein
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