U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PGK1 3-phosphoglycerate kinase [ Scheffersomyces stipitis CBS 6054 ]

Gene ID: 4839476, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
PGK1
Gene description
3-phosphoglycerate kinase
Locus tag
PICST_78267
Gene type
protein coding
RNA name
3-phosphoglycerate kinase
RefSeq status
PROVISIONAL
Organism
Scheffersomyces stipitis CBS 6054 (strain: CBS 6054)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Scheffersomyces
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PGK1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_009045.1 (246741..248098)

Chromosome 5 - NC_009045.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_009045.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. Jeffries TW, et al. Nat Biotechnol, 2007 Mar. PMID 17334359
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphoglycerate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gluconeogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Names
3-phosphoglycerate kinase
XP_001384704.1
  • phosphoglycerate kinase [EC:2.7.2.3] [KO:K00927]
    go_function phosphoglycerate kinase activity
    go_process glycolysis

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009045.1 Reference assembly

    Range
    246741..248098
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001384667.1 → XP_001384704.1  3-phosphoglycerate kinase [Scheffersomyces stipitis CBS 6054]

    See identical proteins and their annotated locations for XP_001384704.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A3LUY2
    Conserved Domains (1) summary
    cl00198
    Location:3 → 415
    Phosphoglycerate_kinase; Phosphoglycerate kinase (PGK) is a monomeric enzyme which catalyzes the transfer of the high-energy phosphate group of 1,3-bisphosphoglycerate to ADP, forming ATP and 3-phosphoglycerate. This reaction represents the first of the two substrate-level ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials