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LOC4814476 lanC-like protein 3 homolog [ Drosophila pseudoobscura ]

Gene ID: 4814476, updated on 10-May-2024

Summary

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Gene symbol
LOC4814476
Gene description
lanC-like protein 3 homolog
See related
EnsemblRapid:LOC4814476
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila pseudoobscura
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Orthologs
fruit fly all
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Genomic context

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See LOC4814476 in Genome Data Viewer
Location:
chromosome: X
Exon count:
2
Annotation release Status Assembly Chr Location
104 current UCI_Dpse_MV25 (GCF_009870125.1) X NC_046683.1 (17452525..17454805, complement)

Chromosome X - NC_046683.1Genomic Context describing neighboring genes Neighboring gene apyrase Neighboring gene uncharacterized LOC26532602 Neighboring gene growth hormone-inducible transmembrane protein Neighboring gene uncharacterized LOC4814495 Neighboring gene uncharacterized LOC26532967

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046683.1 Chromosome X Reference UCI_Dpse_MV25 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptide modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lanC-like protein 3 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila pseudoobscura Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCI_Dpse_MV25 Primary Assembly

Genomic

  1. NC_046683.1 Reference UCI_Dpse_MV25 Primary Assembly

    Range
    17452525..17454805 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001354526.4 → XP_001354562.1  lanC-like protein 3 homolog

    See identical proteins and their annotated locations for XP_001354562.1

    UniProtKB/Swiss-Prot
    Q29HZ1
    Related
    XP_001354562.1, XM_001354526.4
    Conserved Domains (1) summary
    cd04794
    Location:56 → 414
    euk_LANCL; Eukaryotic Lanthionine synthetase C-like protein

  2. XM_015185979.2 → XP_015041465.1  lanC-like protein 3 homolog

    UniProtKB/Swiss-Prot
    Q29HZ1
    Related
    XP_015041465.1, XM_015185979.2
    Conserved Domains (1) summary
    cd04794
    Location:56 → 414
    euk_LANCL; Eukaryotic Lanthionine synthetase C-like protein
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q29HZ1.1 GenPept UniProtKB/Swiss-Prot:Q29HZ1

Gene LinkOut

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Molecular Biology Databases
Research Materials