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LYG2 lysozyme g2 [ Canis lupus familiaris (dog) ]

Gene ID: 481338, updated on 17-Aug-2024

Summary

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Official Symbol
LYG2provided by VGNC
Official Full Name
lysozyme g2provided by VGNC
Primary source
VGNC:VGNC:42881
See related
Ensembl:ENSCAFG00845017793
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See LYG2 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 10 NC_051814.1 (44330878..44342283)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 10 NC_006592.4 (43382989..43394586)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 10 NC_049231.1 (44508926..44520331)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 10 NC_049270.1 (44041728..44053327)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 10 NC_049751.1 (44324894..44336299)

Chromosome 10 - NC_051814.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111097713 Neighboring gene thioredoxin domain containing 9 Neighboring gene uncharacterized LOC102153480 Neighboring gene lysozyme g1 Neighboring gene cytochrome c oxidase subunit NDUFA4-like Neighboring gene mitochondrial ribosomal protein L30

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of kinetic folding intermediates of recombinant canine milk lysozyme by stopped-flow circular dichroism. Nakao M, et al. Biochemistry, 2005 May 3. PMID 15850402

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. A schematic model of the refolding of canine milk lysozyme is proposed that is consistent with the hierarchical mechanism of protein folding.
    Title: Characterization of kinetic folding intermediates of recombinant canine milk lysozyme by stopped-flow circular dichroism.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysozyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in defense response to Gram-positive bacterium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidoglycan catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysozyme g-like protein 2
XP_005626082.1
XP_038345565.1
XP_038405461.1
XP_038469414.1
XP_038534789.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051814.1 Reference ROS_Cfam_1.0

    Range
    44330878..44342283
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038678861.1 → XP_038534789.1  lysozyme g-like protein 2

    UniProtKB/TrEMBL
    A0A8C0LGB4, A0A8C0SRZ9, A0A8I3P4K9
    Related
    ENSCAFP00845024715.1, ENSCAFT00845031573.1
    Conserved Domains (1) summary
    cd01021
    Location:47 → 211
    GEWL; Goose egg-white lysozyme

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049270.1 Alternate UMICH_Zoey_3.1

    Range
    44041728..44053327
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038489637.1 → XP_038345565.1  lysozyme g-like protein 2

    Conserved Domains (1) summary
    cd01021
    Location:47 → 211
    GEWL; Goose egg-white lysozyme

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049751.1 Alternate UNSW_CanFamBas_1.0

    Range
    44324894..44336299
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038613486.1 → XP_038469414.1  lysozyme g-like protein 2

    Conserved Domains (1) summary
    cd01021
    Location:47 → 211
    GEWL; Goose egg-white lysozyme

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049231.1 Alternate UU_Cfam_GSD_1.0

    Range
    44508926..44520331
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038549533.1 → XP_038405461.1  lysozyme g-like protein 2

    UniProtKB/TrEMBL
    A0A8C0LGB4, A0A8C0SRZ9, A0A8I3P4K9
    Conserved Domains (1) summary
    cd01021
    Location:47 → 211
    GEWL; Goose egg-white lysozyme

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006592.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    43382989..43394586
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005626025.3 → XP_005626082.1  lysozyme g-like protein 2

    See identical proteins and their annotated locations for XP_005626082.1

    UniProtKB/TrEMBL
    A0A8C0LGB4, A0A8C0SRZ9, A0A8I3P4K9
    Conserved Domains (1) summary
    cd01021
    Location:47 → 211
    GEWL; Goose egg-white lysozyme
Nucleotide Protein
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