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SLC35E3 solute carrier family 35 member E3 [ Canis lupus familiaris (dog) ]

Gene ID: 481154, updated on 17-Aug-2024

Summary

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Official Symbol
SLC35E3provided by VGNC
Official Full Name
solute carrier family 35 member E3provided by VGNC
Primary source
VGNC:VGNC:54545
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See SLC35E3 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 10 NC_051814.1 (11016466..11032395)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 10 NC_006592.4 (10825057..10840902)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 10 NC_049231.1 (11252547..11268378)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 10 NC_049270.1 (10884116..10900001)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 10 NC_049751.1 (11130477..11146320)

Chromosome 10 - NC_051814.1Genomic Context describing neighboring genes Neighboring gene RAP1B, member of RAS oncogene family Neighboring gene nucleoporin 107 Neighboring gene uncharacterized LOC119873587 Neighboring gene MDM2 proto-oncogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleotide-sugar transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 35 member E3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051814.1 Reference ROS_Cfam_1.0

    Range
    11016466..11032395
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038679304.1 → XP_038535232.1  solute carrier family 35 member E3 isoform X2

    UniProtKB/TrEMBL
    A0A8C0KWJ9, A0A8C0KXP9, A0A8C0MSU5, A0A8I3P023
    Conserved Domains (1) summary
    cl26744
    Location:13 → 218
    TPT; Triose-phosphate Transporter family

  2. XM_038679303.1 → XP_038535231.1  solute carrier family 35 member E3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KXP9, A0A8C0KZP6, A0A8C0MSU5, A0A8C0N0T2, A0A8I3P023
    Conserved Domains (1) summary
    cl26744
    Location:13 → 294
    TPT; Triose-phosphate Transporter family

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049270.1 Alternate UMICH_Zoey_3.1

    Range
    10884116..10900001
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038488079.1 → XP_038344007.1  solute carrier family 35 member E3 isoform X2

    Conserved Domains (1) summary
    cl26744
    Location:13 → 218
    TPT; Triose-phosphate Transporter family

  2. XM_038488078.1 → XP_038344006.1  solute carrier family 35 member E3 isoform X1

    Conserved Domains (1) summary
    cl26744
    Location:13 → 294
    TPT; Triose-phosphate Transporter family

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049751.1 Alternate UNSW_CanFamBas_1.0

    Range
    11130477..11146320
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038613952.1 → XP_038469880.1  solute carrier family 35 member E3 isoform X2

    Conserved Domains (1) summary
    cl26744
    Location:13 → 218
    TPT; Triose-phosphate Transporter family

  2. XM_038613951.1 → XP_038469879.1  solute carrier family 35 member E3 isoform X1

    Conserved Domains (1) summary
    cl26744
    Location:13 → 294
    TPT; Triose-phosphate Transporter family

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049231.1 Alternate UU_Cfam_GSD_1.0

    Range
    11252547..11268378
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038549971.1 → XP_038405899.1  solute carrier family 35 member E3 isoform X2

    UniProtKB/TrEMBL
    A0A8C0KWJ9, A0A8C0KXP9, A0A8C0MSU5, A0A8I3P023
    Conserved Domains (1) summary
    cl26744
    Location:13 → 218
    TPT; Triose-phosphate Transporter family

  2. XM_038549970.1 → XP_038405898.1  solute carrier family 35 member E3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KXP9, A0A8C0KZP6, A0A8C0MSU5, A0A8C0N0T2, A0A8I3P023
    Conserved Domains (1) summary
    cl26744
    Location:13 → 294
    TPT; Triose-phosphate Transporter family

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006592.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    10825057..10840902
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038634366.1 → XP_038490294.1  solute carrier family 35 member E3 isoform X2

    UniProtKB/TrEMBL
    A0A8C0KWJ9, A0A8C0KXP9, A0A8C0MSU5, A0A8I3P023
    Conserved Domains (1) summary
    cl26744
    Location:13 → 218
    TPT; Triose-phosphate Transporter family

  2. XM_038634361.1 → XP_038490289.1  solute carrier family 35 member E3 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KXP9, A0A8C0KZP6, A0A8C0MSU5, A0A8C0N0T2, A0A8I3P023
    Conserved Domains (1) summary
    cl26744
    Location:13 → 294
    TPT; Triose-phosphate Transporter family
Nucleotide Protein
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