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Pgant3 Polypeptide N-Acetylgalactosaminyltransferase 3 [ Drosophila pseudoobscura ]

Gene ID: 4803469, updated on 24-May-2024

Summary

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Gene symbol
Pgant3
Gene description
Polypeptide N-Acetylgalactosaminyltransferase 3
See related
EnsemblRapid:LOC4803469
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila pseudoobscura
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Orthologs
fruit fly all
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Genomic context

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See Pgant3 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
104 current UCI_Dpse_MV25 (GCF_009870125.1) 3 NC_046680.1 (4843330..4846885, complement)

Chromosome 3 - NC_046680.1Genomic Context describing neighboring genes Neighboring gene protein late bloomer Neighboring gene protein late bloomer Neighboring gene protein late bloomer Neighboring gene protein late bloomer Neighboring gene protein late bloomer

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046680.1 Chromosome 3 Reference UCI_Dpse_MV25 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila pseudoobscura Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCI_Dpse_MV25 Primary Assembly

Genomic

  1. NC_046680.1 Reference UCI_Dpse_MV25 Primary Assembly

    Range
    4843330..4846885 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001360150.4 → XP_001360187.1  polypeptide N-acetylgalactosaminyltransferase 3

    See identical proteins and their annotated locations for XP_001360187.1

    UniProtKB/TrEMBL
    A0A6I8USG2
    Related
    XP_001360187.1, XM_001360150.4
    Conserved Domains (4) summary
    cd02510
    Location:153 → 457
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:524 → 660
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:515 → 658
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    pfam13641
    Location:150 → 386
    Glyco_tranf_2_3; Glycosyltransferase like family 2
Nucleotide Protein Strain
Heading Accession and Version

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