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USP7 ubiquitin specific peptidase 7 [ Canis lupus familiaris (dog) ]

Gene ID: 479854, updated on 17-Aug-2024

Summary

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Official Symbol
USP7provided by VGNC
Official Full Name
ubiquitin specific peptidase 7provided by VGNC
Primary source
VGNC:VGNC:54088
See related
Ensembl:ENSCAFG00845013702
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See USP7 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
33
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (33449047..33514314)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (34641327..34706509)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (33570486..33608545)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (33251796..33316926)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (33121375..33186820)

Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene glutamate ionotropic receptor NMDA type subunit 2A Neighboring gene uncharacterized LOC111096303 Neighboring gene HUWE1 associated protein modifying stress responses Neighboring gene uncharacterized LOC111096306 Neighboring gene calcium regulated heat stable protein 1 Neighboring gene LITAF domain containing

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein stability IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase 7
XP_005621615.1
XP_005621616.1
XP_038335109.1
XP_038335110.1
XP_038335111.1
XP_038396335.1
XP_038396336.1
XP_038403363.1
XP_038460435.1
XP_038460436.1
XP_038460437.1
XP_038525121.1
XP_038525122.1
XP_038525123.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051810.1 Reference ROS_Cfam_1.0

    Range
    33449047..33514314
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038669193.1 → XP_038525121.1  ubiquitin carboxyl-terminal hydrolase 7 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LM72, A0A8C0RFU6, A0A8I3NH60
    Related
    ENSCAFP00845019320.1, ENSCAFT00845024561.1
    Conserved Domains (1) summary
    COG5077
    Location:58 → 1102
    COG5077; Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]

  2. XM_038669194.1 → XP_038525122.1  ubiquitin carboxyl-terminal hydrolase 7 isoform X2

    UniProtKB/TrEMBL
    A0A8C0LM72, A0A8C0Q8T7, A0A8I3NFM5
    Related
    ENSCAFP00845019388.1, ENSCAFT00845024644.1
    Conserved Domains (1) summary
    COG5077
    Location:40 → 1084
    COG5077; Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]

  3. XM_038669195.1 → XP_038525123.1  ubiquitin carboxyl-terminal hydrolase 7 isoform X3

    UniProtKB/TrEMBL
    A0A8C0LM72, A0A8C0RG53
    Conserved Domains (1) summary
    COG5077
    Location:6 → 1001
    COG5077; Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]

RNA

  1. XR_005428616.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049266.1 Alternate UMICH_Zoey_3.1

    Range
    33251796..33316926
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038479181.1 → XP_038335109.1  ubiquitin carboxyl-terminal hydrolase 7 isoform X1

  2. XM_038479182.1 → XP_038335110.1  ubiquitin carboxyl-terminal hydrolase 7 isoform X2

    Conserved Domains (1) summary
    COG5077
    Location:40 → 1084
    COG5077; Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]

  3. XM_038479183.1 → XP_038335111.1  ubiquitin carboxyl-terminal hydrolase 7 isoform X3

    Conserved Domains (1) summary
    COG5077
    Location:6 → 1001
    COG5077; Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]

RNA

  1. XR_005327009.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

    Range
    33121375..33186820
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038604507.1 → XP_038460435.1  ubiquitin carboxyl-terminal hydrolase 7 isoform X1

    Conserved Domains (1) summary
    COG5077
    Location:58 → 1102
    COG5077; Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]

  2. XM_038604508.1 → XP_038460436.1  ubiquitin carboxyl-terminal hydrolase 7 isoform X2

    Conserved Domains (1) summary
    COG5077
    Location:40 → 1084
    COG5077; Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]

  3. XM_038604509.1 → XP_038460437.1  ubiquitin carboxyl-terminal hydrolase 7 isoform X3

    Conserved Domains (1) summary
    COG5077
    Location:6 → 1001
    COG5077; Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]

RNA

  1. XR_005395450.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

    Range
    33570486..33608545
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038540407.1 → XP_038396335.1  ubiquitin carboxyl-terminal hydrolase 7 isoform X2

    UniProtKB/TrEMBL
    A0A8C0LM72, A0A8C0Q8T7, A0A8I3NFM5
    Conserved Domains (1) summary
    COG5077
    Location:40 → 1084
    COG5077; Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]

  2. XM_038540408.1 → XP_038396336.1  ubiquitin carboxyl-terminal hydrolase 7 isoform X3

    UniProtKB/TrEMBL
    A0A8C0LM72, A0A8C0RG53
    Conserved Domains (1) summary
    COG5077
    Location:6 → 1001
    COG5077; Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]

RNA

  1. XR_005360920.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    34641327..34706509
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038547435.1 → XP_038403363.1  ubiquitin carboxyl-terminal hydrolase 7 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LM72, A0A8C0RFU6, A0A8I3NH60
    Conserved Domains (1) summary
    COG5077
    Location:58 → 1102
    COG5077; Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]

  2. XM_005621558.4 → XP_005621615.1  ubiquitin carboxyl-terminal hydrolase 7 isoform X2

    UniProtKB/TrEMBL
    A0A8C0LM72, A0A8C0Q8T7, A0A8I3NFM5
    Conserved Domains (1) summary
    COG5077
    Location:40 → 1084
    COG5077; Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]

  3. XM_005621559.4 → XP_005621616.1  ubiquitin carboxyl-terminal hydrolase 7 isoform X3

    See identical proteins and their annotated locations for XP_005621616.1

    UniProtKB/TrEMBL
    A0A8C0LM72, A0A8C0RG53
    Conserved Domains (1) summary
    COG5077
    Location:6 → 1001
    COG5077; Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones]

RNA

  1. XR_005364426.1 RNA Sequence

Nucleotide Protein
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