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UQCRC2 ubiquinol-cytochrome c reductase core protein 2 [ Canis lupus familiaris (dog) ]

Gene ID: 479815, updated on 17-Aug-2024

Summary

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Official Symbol
UQCRC2provided by VGNC
Official Full Name
ubiquinol-cytochrome c reductase core protein 2provided by VGNC
Primary source
VGNC:VGNC:48164
See related
Ensembl:ENSCAFG00845002870
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See UQCRC2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
15
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (23773531..23799084, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (25064452..25089987, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (23860075..23885610, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (23574933..23600460, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (23475077..23500590, complement)

Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene von Willebrand factor A domain containing 3A Neighboring gene uncharacterized LOC111096282 Neighboring gene modulator of smoothened Neighboring gene PDZ domain containing 9 Neighboring gene ATP binding cassette subfamily A member 16 Neighboring gene NEDD8-like Neighboring gene small ubiquitin-related modifier 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytochrome b-c1 complex subunit 2, mitochondrial
Names
ubiquinol-cytochrome c reductase core protein II

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051810.1 Reference ROS_Cfam_1.0

    Range
    23773531..23799084 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038668892.1 → XP_038524820.1  cytochrome b-c1 complex subunit 2, mitochondrial

    UniProtKB/TrEMBL
    A0A8C0P0Z5, A0A8C0R5C8, A0A8I3MM40
    Related
    ENSCAFP00845004045.1, ENSCAFT00845005087.1
    Conserved Domains (1) summary
    COG0612
    Location:27 → 434
    PqqL; Predicted Zn-dependent peptidase [General function prediction only]

RNA

  1. XR_005428508.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049266.1 Alternate UMICH_Zoey_3.1

    Range
    23574933..23600460 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038478840.1 → XP_038334768.1  cytochrome b-c1 complex subunit 2, mitochondrial

    Conserved Domains (1) summary
    COG0612
    Location:27 → 434
    PqqL; Predicted Zn-dependent peptidase [General function prediction only]

RNA

  1. XR_005326923.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

    Range
    23475077..23500590 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038604171.1 → XP_038460099.1  cytochrome b-c1 complex subunit 2, mitochondrial

    Conserved Domains (1) summary
    COG0612
    Location:27 → 434
    PqqL; Predicted Zn-dependent peptidase [General function prediction only]

RNA

  1. XR_005395365.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

    Range
    23860075..23885610 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038540091.1 → XP_038396019.1  cytochrome b-c1 complex subunit 2, mitochondrial

    UniProtKB/TrEMBL
    A0A8C0P0Z5, A0A8C0R5C8, A0A8I3MM40
    Conserved Domains (1) summary
    COG0612
    Location:27 → 434
    PqqL; Predicted Zn-dependent peptidase [General function prediction only]

RNA

  1. XR_005360834.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    25064452..25089987 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_536942.6 → XP_536942.1  cytochrome b-c1 complex subunit 2, mitochondrial

    UniProtKB/TrEMBL
    A0A8C0P0Z5, A0A8C0R5C8, A0A8I3MM40
    Conserved Domains (1) summary
    COG0612
    Location:27 → 434
    PqqL; Predicted Zn-dependent peptidase [General function prediction only]

RNA

  1. XR_002627550.1 RNA Sequence

Nucleotide Protein
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