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COG7 component of oligomeric golgi complex 7 [ Canis lupus familiaris (dog) ]

Gene ID: 479808, updated on 17-Aug-2024

Summary

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Official Symbol
COG7provided by VGNC
Official Full Name
component of oligomeric golgi complex 7provided by VGNC
Primary source
VGNC:VGNC:39453
See related
Ensembl:ENSCAFG00845001841
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See COG7 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
17
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (22496914..22575173)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (23920636..23998886)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (22599205..22677535)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (22301301..22379580)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (22204324..22282641)

Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111096279 Neighboring gene golgi associated, gamma adaptin ear containing, ARF binding protein 2 Neighboring gene uncharacterized LOC111096278 Neighboring gene uncharacterized LOC119872179 Neighboring gene sodium channel epithelial 1 subunit beta Neighboring gene uncharacterized LOC102152642

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 7; LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 7
XP_038334713.1
XP_038395960.1
XP_038395961.1
XP_038400395.1
XP_038460037.1
XP_038460038.1
XP_038524760.1
XP_038524761.1
XP_536935.4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051810.1 Reference ROS_Cfam_1.0

    Range
    22496914..22575173
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038668832.1 → XP_038524760.1  conserved oligomeric Golgi complex subunit 7 isoform X1

    UniProtKB/TrEMBL
    A0A8C0L798, A0A8C0NXH8, A0A8I3MQW4, A0A8P0SLW3
    Related
    ENSCAFP00845002560.1, ENSCAFT00845003227.1
    Conserved Domains (1) summary
    pfam10191
    Location:2 → 767
    COG7; Golgi complex component 7 (COG7)

  2. XM_038668833.1 → XP_038524761.1  conserved oligomeric Golgi complex subunit 7 isoform X2

    UniProtKB/TrEMBL
    A0A8C0NSX2, A0A8I3MQW4, A0A8P0SLW3
    Conserved Domains (1) summary
    pfam10191
    Location:2 → 739
    COG7; Golgi complex component 7 (COG7)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049266.1 Alternate UMICH_Zoey_3.1

    Range
    22301301..22379580
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038478785.1 → XP_038334713.1  LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 7 isoform X1

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

    Range
    22204324..22282641
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038604110.1 → XP_038460038.1  conserved oligomeric Golgi complex subunit 7 isoform X2

    Conserved Domains (1) summary
    pfam10191
    Location:2 → 739
    COG7; Golgi complex component 7 (COG7)

  2. XM_038604109.1 → XP_038460037.1  conserved oligomeric Golgi complex subunit 7 isoform X1

    Conserved Domains (1) summary
    pfam10191
    Location:2 → 767
    COG7; Golgi complex component 7 (COG7)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

    Range
    22599205..22677535
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038540033.1 → XP_038395961.1  conserved oligomeric Golgi complex subunit 7 isoform X2

    UniProtKB/TrEMBL
    A0A8C0NSX2, A0A8I3MQW4, A0A8P0SLW3
    Conserved Domains (1) summary
    pfam10191
    Location:2 → 739
    COG7; Golgi complex component 7 (COG7)

  2. XM_038540032.1 → XP_038395960.1  conserved oligomeric Golgi complex subunit 7 isoform X1

    UniProtKB/TrEMBL
    A0A8C0L798, A0A8C0NXH8, A0A8I3MQW4, A0A8P0SLW3
    Conserved Domains (1) summary
    pfam10191
    Location:2 → 767
    COG7; Golgi complex component 7 (COG7)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    23920636..23998886
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038544467.1 → XP_038400395.1  conserved oligomeric Golgi complex subunit 7 isoform X2

    UniProtKB/TrEMBL
    A0A8C0NSX2, A0A8I3MQW4, A0A8P0SLW3
    Conserved Domains (1) summary
    pfam10191
    Location:2 → 739
    COG7; Golgi complex component 7 (COG7)

  2. XM_536935.7 → XP_536935.4  conserved oligomeric Golgi complex subunit 7 isoform X1

    UniProtKB/TrEMBL
    A0A8C0L798, A0A8C0NXH8, A0A8I3MQW4, A0A8P0SLW3
    Conserved Domains (1) summary
    pfam10191
    Location:2 → 767
    COG7; Golgi complex component 7 (COG7)
Nucleotide Protein
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