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AARS1 alanyl-tRNA synthetase 1 [ Canis lupus familiaris (dog) ]

Gene ID: 479656, updated on 17-Aug-2024

Summary

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Official Symbol
AARS1provided by VGNC
Official Full Name
alanyl-tRNA synthetase 1provided by VGNC
Primary source
VGNC:VGNC:37415
See related
Ensembl:ENSCAFG00845004979
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
AARS
Orthologs
human mouse all
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Genomic context

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See AARS1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
24
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 5 NC_051809.1 (76725260..76750984, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 5 NC_006587.4 (76250625..76276397, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 5 NC_049226.1 (76862531..76888314, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 5 NC_049265.1 (76547302..76573204, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 5 NC_049746.1 (76370741..76396505, complement)

Chromosome 5 - NC_051809.1Genomic Context describing neighboring genes Neighboring gene RNA-binding Raly-like protein Neighboring gene transfer RNA glycine (anticodon GCC) Neighboring gene exosome component 6 Neighboring gene DEAD-box helicase 19B Neighboring gene uncharacterized LOC119871952

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alanine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables amino acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aminoacyl-tRNA editing activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in alanyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tRNA modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alanine--tRNA ligase, cytoplasmic
XP_022274907.1
XP_038333089.1
XP_038333090.1
XP_038333091.1
XP_038333092.1
XP_038383831.1
XP_038383851.1
XP_038394272.1
XP_038394273.1
XP_038394274.1
XP_038394275.1
XP_038458397.1
XP_038458398.1
XP_038458399.1
XP_038458400.1
XP_038523001.1
XP_038523002.1
XP_038523004.1
XP_038523005.1
XP_536788.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051809.1 Reference ROS_Cfam_1.0

    Range
    76725260..76750984 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038667076.1 → XP_038523004.1  alanine--tRNA ligase, cytoplasmic isoform X2

    UniProtKB/TrEMBL
    A0A8C0L9K9, A0A8C0SNH1, A0A8I3NAD6, A0A8P0SNW8
    Conserved Domains (1) summary
    PLN02900
    Location:6 → 961
    PLN02900; alanyl-tRNA synthetase

  2. XM_038667077.1 → XP_038523005.1  alanine--tRNA ligase, cytoplasmic isoform X3

    UniProtKB/TrEMBL
    A0A8I3NAD6, A0A8P0SNW8
    Conserved Domains (1) summary
    PLN02900
    Location:37 → 954
    PLN02900; alanyl-tRNA synthetase

  3. XM_038667073.1 → XP_038523001.1  alanine--tRNA ligase, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    A0A8I3NAD6, A0A8P0SNW8
    Conserved Domains (1) summary
    PLN02900
    Location:37 → 992
    PLN02900; alanyl-tRNA synthetase

  4. XM_038667074.1 → XP_038523002.1  alanine--tRNA ligase, cytoplasmic isoform X2

    UniProtKB/TrEMBL
    A0A8C0L9K9, A0A8C0SNH1, A0A8I3NAD6, A0A8P0SNW8
    Related
    ENSCAFP00845007023.1, ENSCAFT00845008915.1
    Conserved Domains (1) summary
    PLN02900
    Location:6 → 961
    PLN02900; alanyl-tRNA synthetase

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049265.1 Alternate UMICH_Zoey_3.1

    Range
    76547302..76573204 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038477161.1 → XP_038333089.1  alanine--tRNA ligase, cytoplasmic isoform X4

  2. XM_038477163.1 → XP_038333091.1  alanine--tRNA ligase, cytoplasmic isoform X2

    Conserved Domains (1) summary
    PLN02900
    Location:6 → 961
    PLN02900; alanyl-tRNA synthetase

  3. XM_038477162.1 → XP_038333090.1  alanine--tRNA ligase, cytoplasmic isoform X2

    Conserved Domains (1) summary
    PLN02900
    Location:6 → 961
    PLN02900; alanyl-tRNA synthetase

  4. XM_038477164.1 → XP_038333092.1  alanine--tRNA ligase, cytoplasmic isoform X5

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049746.1 Alternate UNSW_CanFamBas_1.0

    Range
    76370741..76396505 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038602471.1 → XP_038458399.1  alanine--tRNA ligase, cytoplasmic isoform X2

    Conserved Domains (1) summary
    PLN02900
    Location:6 → 961
    PLN02900; alanyl-tRNA synthetase

  2. XM_038602472.1 → XP_038458400.1  alanine--tRNA ligase, cytoplasmic isoform X3

    Conserved Domains (1) summary
    PLN02900
    Location:37 → 954
    PLN02900; alanyl-tRNA synthetase

  3. XM_038602469.1 → XP_038458397.1  alanine--tRNA ligase, cytoplasmic isoform X1

    Conserved Domains (1) summary
    PLN02900
    Location:37 → 992
    PLN02900; alanyl-tRNA synthetase

  4. XM_038602470.1 → XP_038458398.1  alanine--tRNA ligase, cytoplasmic isoform X2

    Conserved Domains (1) summary
    PLN02900
    Location:6 → 961
    PLN02900; alanyl-tRNA synthetase

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049226.1 Alternate UU_Cfam_GSD_1.0

    Range
    76862531..76888314 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038538346.1 → XP_038394274.1  alanine--tRNA ligase, cytoplasmic isoform X2

    UniProtKB/TrEMBL
    A0A8C0L9K9, A0A8C0SNH1, A0A8I3NAD6, A0A8P0SNW8
    Conserved Domains (1) summary
    PLN02900
    Location:6 → 961
    PLN02900; alanyl-tRNA synthetase

  2. XM_038538347.1 → XP_038394275.1  alanine--tRNA ligase, cytoplasmic isoform X3

    UniProtKB/TrEMBL
    A0A8I3NAD6, A0A8P0SNW8
    Conserved Domains (1) summary
    PLN02900
    Location:37 → 954
    PLN02900; alanyl-tRNA synthetase

  3. XM_038538344.1 → XP_038394272.1  alanine--tRNA ligase, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    A0A8I3NAD6, A0A8P0SNW8
    Conserved Domains (1) summary
    PLN02900
    Location:37 → 992
    PLN02900; alanyl-tRNA synthetase

  4. XM_038538345.1 → XP_038394273.1  alanine--tRNA ligase, cytoplasmic isoform X2

    UniProtKB/TrEMBL
    A0A8C0L9K9, A0A8C0SNH1, A0A8I3NAD6, A0A8P0SNW8
    Conserved Domains (1) summary
    PLN02900
    Location:6 → 961
    PLN02900; alanyl-tRNA synthetase

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006587.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    76250625..76276397 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022419199.2 → XP_022274907.1  alanine--tRNA ligase, cytoplasmic isoform X2

    UniProtKB/TrEMBL
    A0A8C0L9K9, A0A8C0SNH1, A0A8I3NAD6, A0A8P0SNW8
    Conserved Domains (1) summary
    PLN02900
    Location:6 → 961
    PLN02900; alanyl-tRNA synthetase

  2. XM_038527923.1 → XP_038383851.1  alanine--tRNA ligase, cytoplasmic isoform X3

    UniProtKB/TrEMBL
    A0A8I3NAD6, A0A8P0SNW8
    Conserved Domains (1) summary
    PLN02900
    Location:37 → 954
    PLN02900; alanyl-tRNA synthetase

  3. XM_038527903.1 → XP_038383831.1  alanine--tRNA ligase, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    A0A8I3NAD6, A0A8P0SNW8
    Conserved Domains (1) summary
    PLN02900
    Location:37 → 992
    PLN02900; alanyl-tRNA synthetase

  4. XM_536788.5 → XP_536788.2  alanine--tRNA ligase, cytoplasmic isoform X2

    See identical proteins and their annotated locations for XP_536788.2

    UniProtKB/TrEMBL
    A0A8C0L9K9, A0A8C0SNH1, A0A8I3NAD6, A0A8P0SNW8
    Conserved Domains (1) summary
    PLN02900
    Location:6 → 961
    PLN02900; alanyl-tRNA synthetase
Nucleotide Protein
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