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NOL9 nucleolar protein 9 [ Canis lupus familiaris (dog) ]

Gene ID: 479591, updated on 17-Aug-2024

Summary

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Official Symbol
NOL9provided by VGNC
Official Full Name
nucleolar protein 9provided by VGNC
Primary source
VGNC:VGNC:53428
See related
Ensembl:ENSCAFG00845025541
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See NOL9 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 5 NC_051809.1 (60588334..60611485, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 5 NC_006587.4 (60382187..60405345, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 5 NC_049226.1 (60855994..60879354, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 5 NC_049265.1 (60587422..60610564, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 5 NC_049746.1 (60454079..60477234, complement)

Chromosome 5 - NC_051809.1Genomic Context describing neighboring genes Neighboring gene TNF receptor superfamily member 25 Neighboring gene pleckstrin homology and RhoGEF domain containing G5 Neighboring gene taste 1 receptor member 1 Neighboring gene zinc finger and BTB domain containing 48

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polynucleotide 5'-hydroxyl-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polynucleotide 5'-hydroxyl-kinase NOL9
XP_038332599.1
XP_038379360.1
XP_038393739.1
XP_038457891.1
XP_038522483.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051809.1 Reference ROS_Cfam_1.0

    Range
    60588334..60611485 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038666555.1 → XP_038522483.1  polynucleotide 5'-hydroxyl-kinase NOL9

    UniProtKB/TrEMBL
    A0A8C0K5D0, A0A8C0MK47, A0A8C0REM1, A0A8I3PL78
    Related
    ENSCAFP00845035411.1, ENSCAFT00845045162.1
    Conserved Domains (1) summary
    pfam16575
    Location:293 → 402
    CLP1_P; mRNA cleavage and polyadenylation factor CLP1 P-loop

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049265.1 Alternate UMICH_Zoey_3.1

    Range
    60587422..60610564 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038476671.1 → XP_038332599.1  polynucleotide 5'-hydroxyl-kinase NOL9

    Conserved Domains (1) summary
    pfam16575
    Location:293 → 402
    CLP1_P; mRNA cleavage and polyadenylation factor CLP1 P-loop

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049746.1 Alternate UNSW_CanFamBas_1.0

    Range
    60454079..60477234 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038601963.1 → XP_038457891.1  polynucleotide 5'-hydroxyl-kinase NOL9

    Conserved Domains (1) summary
    pfam16575
    Location:293 → 402
    CLP1_P; mRNA cleavage and polyadenylation factor CLP1 P-loop

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049226.1 Alternate UU_Cfam_GSD_1.0

    Range
    60855994..60879354 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038537811.1 → XP_038393739.1  polynucleotide 5'-hydroxyl-kinase NOL9

    UniProtKB/TrEMBL
    A0A8C0K5D0, A0A8C0MK47, A0A8C0REM1, A0A8I3PL78
    Conserved Domains (1) summary
    pfam16575
    Location:293 → 402
    CLP1_P; mRNA cleavage and polyadenylation factor CLP1 P-loop

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006587.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    60382187..60405345 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038523432.1 → XP_038379360.1  polynucleotide 5'-hydroxyl-kinase NOL9

    UniProtKB/TrEMBL
    A0A8C0K5D0, A0A8C0MK47, A0A8C0REM1, A0A8I3PL78
    Conserved Domains (1) summary
    pfam16575
    Location:293 → 402
    CLP1_P; mRNA cleavage and polyadenylation factor CLP1 P-loop
Nucleotide Protein
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