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JHY junctional cadherin complex regulator [ Canis lupus familiaris (dog) ]

Gene ID: 479407, updated on 17-Aug-2024

Summary

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Official Symbol
JHYprovided by VGNC
Official Full Name
junctional cadherin complex regulatorprovided by VGNC
Primary source
VGNC:VGNC:49595
See related
Ensembl:ENSCAFG00845012996
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
C5H11orf63
Orthologs
human mouse all
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Genomic context

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See JHY in Genome Data Viewer
Location:
chromosome: 5
Exon count:
14
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 5 NC_051809.1 (11332811..11393867, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 5 NC_006587.4 (11437780..11498889, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 5 NC_049226.1 (11413069..11474463, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 5 NC_049265.1 (11436137..11497147, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 5 NC_049746.1 (11375189..11436237, complement)

Chromosome 5 - NC_051809.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD14 Neighboring gene heat shock protein family A (Hsp70) member 8 Neighboring gene brain specific homeobox Neighboring gene cytotoxic and regulatory T cell molecule Neighboring gene ubiquitin associated and SH3 domain containing B Neighboring gene uncharacterized LOC119871793

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in axoneme assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: jhy protein homolog; jhy protein homolog
Names
chromosome 5 C11orf63 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051809.1 Reference ROS_Cfam_1.0

    Range
    11332811..11393867 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038664593.1 → XP_038520521.1  jhy protein homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C0KBJ2, A0A8C0LYI7, A0A8C0SH35, A0A8I3RXA4
    Related
    ENSCAFP00845018129.1, ENSCAFT00845023122.1
    Conserved Domains (1) summary
    pfam15261
    Location:654 → 773
    DUF4591; Domain of unknown function (DUF4591)

  2. XM_038664594.1 → XP_038520522.1  jhy protein homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C0KBJ2, A0A8C0LYI7, A0A8C0SH35, A0A8I3RXA4
    Conserved Domains (1) summary
    pfam15261
    Location:654 → 773
    DUF4591; Domain of unknown function (DUF4591)

  3. XM_038664595.1 → XP_038520523.1  jhy protein homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C0KBJ2, A0A8C0LYI7, A0A8C0SH35, A0A8I3RXA4
    Conserved Domains (1) summary
    pfam15261
    Location:654 → 773
    DUF4591; Domain of unknown function (DUF4591)

  4. XM_038664596.1 → XP_038520524.1  jhy protein homolog isoform X2

    UniProtKB/TrEMBL
    A0A8C0SH35
    Conserved Domains (1) summary
    pfam15261
    Location:654 → 713
    DUF4591; Domain of unknown function (DUF4591)

  5. XM_038664597.1 → XP_038520525.1  jhy protein homolog isoform X3

    UniProtKB/TrEMBL
    A0A8C0R9U7, A0A8I3RXA9

RNA

  1. XR_005426733.1 RNA Sequence

  2. XR_005426734.1 RNA Sequence

    Related
    ENSCAFT00845023179.1

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049265.1 Alternate UMICH_Zoey_3.1

    Range
    11436137..11497147 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038474720.1 → XP_038330648.1  LOW QUALITY PROTEIN: jhy protein homolog isoform X1

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049746.1 Alternate UNSW_CanFamBas_1.0

    Range
    11375189..11436237 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038600052.1 → XP_038455980.1  jhy protein homolog isoform X1

  2. XM_038600053.1 → XP_038455981.1  jhy protein homolog isoform X1

  3. XM_038600054.1 → XP_038455982.1  jhy protein homolog isoform X1

  4. XM_038600055.1 → XP_038455983.1  jhy protein homolog isoform X2

  5. XM_038600056.1 → XP_038455984.1  jhy protein homolog isoform X3

RNA

  1. XR_005393629.1 RNA Sequence

  2. XR_005393630.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049226.1 Alternate UU_Cfam_GSD_1.0

    Range
    11413069..11474463 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038535852.1 → XP_038391780.1  jhy protein homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C0KBJ2, A0A8C0LYI7, A0A8C0SH35, A0A8I3RXA4
    Conserved Domains (1) summary
    pfam15261
    Location:654 → 773
    DUF4591; Domain of unknown function (DUF4591)

  2. XM_038535853.1 → XP_038391781.1  jhy protein homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C0KBJ2, A0A8C0LYI7, A0A8C0SH35, A0A8I3RXA4
    Conserved Domains (1) summary
    pfam15261
    Location:654 → 773
    DUF4591; Domain of unknown function (DUF4591)

  3. XM_038535854.1 → XP_038391782.1  jhy protein homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C0KBJ2, A0A8C0LYI7, A0A8C0SH35, A0A8I3RXA4
    Conserved Domains (1) summary
    pfam15261
    Location:654 → 773
    DUF4591; Domain of unknown function (DUF4591)

  4. XM_038535855.1 → XP_038391783.1  jhy protein homolog isoform X2

    UniProtKB/TrEMBL
    A0A8C0SH35
    Conserved Domains (1) summary
    pfam15261
    Location:654 → 713
    DUF4591; Domain of unknown function (DUF4591)

  5. XM_038535856.1 → XP_038391784.1  jhy protein homolog isoform X3

    UniProtKB/TrEMBL
    A0A8C0R9U7, A0A8I3RXA9

RNA

  1. XR_005359120.1 RNA Sequence

  2. XR_005359121.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006587.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    11437780..11498889 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_536544.7 → XP_536544.2  jhy protein homolog isoform X1

    See identical proteins and their annotated locations for XP_536544.2

    UniProtKB/TrEMBL
    A0A8C0KBJ2, A0A8C0LYI7, A0A8C0SH35, A0A8I3RXA4
    Conserved Domains (1) summary
    pfam15261
    Location:654 → 773
    DUF4591; Domain of unknown function (DUF4591)

  2. XM_005619652.4 → XP_005619709.1  jhy protein homolog isoform X1

    See identical proteins and their annotated locations for XP_005619709.1

    UniProtKB/TrEMBL
    A0A8C0KBJ2, A0A8C0LYI7, A0A8C0SH35, A0A8I3RXA4
    Conserved Domains (1) summary
    pfam15261
    Location:654 → 773
    DUF4591; Domain of unknown function (DUF4591)

  3. XM_005619651.4 → XP_005619708.1  jhy protein homolog isoform X1

    See identical proteins and their annotated locations for XP_005619708.1

    UniProtKB/TrEMBL
    A0A8C0KBJ2, A0A8C0LYI7, A0A8C0SH35, A0A8I3RXA4
    Conserved Domains (1) summary
    pfam15261
    Location:654 → 773
    DUF4591; Domain of unknown function (DUF4591)

  4. XM_005619653.4 → XP_005619710.1  jhy protein homolog isoform X2

    UniProtKB/TrEMBL
    A0A8C0SH35
    Conserved Domains (1) summary
    pfam15261
    Location:654 → 713
    DUF4591; Domain of unknown function (DUF4591)

  5. XM_022418180.2 → XP_022273888.1  jhy protein homolog isoform X3

    UniProtKB/TrEMBL
    A0A8C0R9U7, A0A8I3RXA9

RNA

  1. XR_002626398.2 RNA Sequence

  2. XR_002626399.2 RNA Sequence

Nucleotide Protein
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