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UGDH UDP-glucose 6-dehydrogenase [ Canis lupus familiaris (dog) ]

Gene ID: 479107, updated on 17-Aug-2024

Summary

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Official Symbol
UGDHprovided by VGNC
Official Full Name
UDP-glucose 6-dehydrogenaseprovided by VGNC
Primary source
VGNC:VGNC:48117
See related
Ensembl:ENSCAFG00845004549
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See UGDH in Genome Data Viewer
Location:
chromosome: 3
Exon count:
12
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 3 NC_051807.1 (73708348..73737653)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 3 NC_006585.4 (75481824..75511112)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 3 NC_049224.1 (73507747..73537066)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 3 NC_049263.1 (72974965..73004279)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 3 NC_049744.1 (73121242..73150553)

Chromosome 3 - NC_051807.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102155382 Neighboring gene small integral membrane protein 14 Neighboring gene uncharacterized LOC119871252 Neighboring gene lipoic acid synthetase Neighboring gene ribosomal protein L9 Neighboring gene klotho beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-glucose 6-dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycosaminoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glucose 6-dehydrogenase
Names
UDP-glucose dehydrogenase
XP_038328399.1
XP_038389375.1
XP_038453672.1
XP_038517877.1
XP_536254.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051807.1 Reference ROS_Cfam_1.0

    Range
    73708348..73737653
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038661949.1 → XP_038517877.1  UDP-glucose 6-dehydrogenase

    UniProtKB/TrEMBL
    A0A8C0JL44, A0A8C0MED8, A0A8I3MSM0, A0A8P0NHF5
    Related
    ENSCAFP00845006428.1, ENSCAFT00845008180.1
    Conserved Domains (1) summary
    PLN02353
    Location:4 → 464
    PLN02353; probable UDP-glucose 6-dehydrogenase

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049263.1 Alternate UMICH_Zoey_3.1

    Range
    72974965..73004279
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038472471.1 → XP_038328399.1  UDP-glucose 6-dehydrogenase

    Conserved Domains (1) summary
    PLN02353
    Location:4 → 464
    PLN02353; probable UDP-glucose 6-dehydrogenase

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049744.1 Alternate UNSW_CanFamBas_1.0

    Range
    73121242..73150553
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038597744.1 → XP_038453672.1  UDP-glucose 6-dehydrogenase

    Conserved Domains (1) summary
    PLN02353
    Location:4 → 464
    PLN02353; probable UDP-glucose 6-dehydrogenase

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049224.1 Alternate UU_Cfam_GSD_1.0

    Range
    73507747..73537066
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038533447.1 → XP_038389375.1  UDP-glucose 6-dehydrogenase

    UniProtKB/TrEMBL
    A0A8C0JL44, A0A8C0MED8, A0A8I3MSM0, A0A8P0NHF5
    Conserved Domains (1) summary
    PLN02353
    Location:4 → 464
    PLN02353; probable UDP-glucose 6-dehydrogenase

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006585.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    75481824..75511112
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_536254.7 → XP_536254.2  UDP-glucose 6-dehydrogenase

    See identical proteins and their annotated locations for XP_536254.2

    UniProtKB/TrEMBL
    A0A8C0JL44, A0A8C0MED8, A0A8I3MSM0, A0A8P0NHF5
    Conserved Domains (1) summary
    PLN02353
    Location:4 → 464
    PLN02353; probable UDP-glucose 6-dehydrogenase
Nucleotide Protein
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