U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LRPAP1 LDL receptor related protein associated protein 1 [ Canis lupus familiaris (dog) ]

Gene ID: 479072, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
LRPAP1provided by VGNC
Official Full Name
LDL receptor related protein associated protein 1provided by VGNC
Primary source
VGNC:VGNC:42780
See related
Ensembl:ENSCAFG00845010689
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LRPAP1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 3 NC_051807.1 (61316241..61328837)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 3 NC_006585.4 (63491109..63503659)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 3 NC_049224.1 (61371717..61384645)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 3 NC_049263.1 (60810231..60822660)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 3 NC_049744.1 (61016034..61028737)

Chromosome 3 - NC_051807.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119871228 Neighboring gene uncharacterized LOC119871229 Neighboring gene docking protein 7 Neighboring gene HGF activator

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lipase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables low-density lipoprotein particle receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables receptor antagonist activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables very-low-density lipoprotein particle receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of receptor internalization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of very-low-density lipoprotein particle clearance IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cis-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in rough endoplasmic reticulum lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alpha-2-macroglobulin receptor-associated protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051807.1 Reference ROS_Cfam_1.0

    Range
    61316241..61328837
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038661676.1 → XP_038517604.1  alpha-2-macroglobulin receptor-associated protein

    UniProtKB/TrEMBL
    A0A8C0M262, A0A8C0R109, A0A8I3N6H6, A0A8P0NGD3
    Related
    ENSCAFP00845014709.1, ENSCAFT00845018838.1
    Conserved Domains (3) summary
    cd14806
    Location:65 → 72
    RAP_D1; 3-helical coiled coil [structural motif]
    pfam06400
    Location:29 → 137
    Alpha-2-MRAP_N; Alpha-2-macroglobulin RAP, N-terminal domain
    pfam06401
    Location:153 → 364
    Alpha-2-MRAP_C; Alpha-2-macroglobulin RAP, C-terminal domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049263.1 Alternate UMICH_Zoey_3.1

    Range
    60810231..60822660
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038472203.1 → XP_038328131.1  alpha-2-macroglobulin receptor-associated protein

    Conserved Domains (3) summary
    cd14806
    Location:65 → 72
    RAP_D1; 3-helical coiled coil [structural motif]
    pfam06400
    Location:29 → 137
    Alpha-2-MRAP_N; Alpha-2-macroglobulin RAP, N-terminal domain
    pfam06401
    Location:153 → 364
    Alpha-2-MRAP_C; Alpha-2-macroglobulin RAP, C-terminal domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049744.1 Alternate UNSW_CanFamBas_1.0

    Range
    61016034..61028737
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038597496.1 → XP_038453424.1  alpha-2-macroglobulin receptor-associated protein

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049224.1 Alternate UU_Cfam_GSD_1.0

    Range
    61371717..61384645
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038533166.1 → XP_038389094.1  alpha-2-macroglobulin receptor-associated protein

    UniProtKB/TrEMBL
    A0A8C0M262, A0A8C0R109, A0A8I3N6H6, A0A8P0NGD3
    Conserved Domains (3) summary
    cd14806
    Location:65 → 72
    RAP_D1; 3-helical coiled coil [structural motif]
    pfam06400
    Location:29 → 137
    Alpha-2-MRAP_N; Alpha-2-macroglobulin RAP, N-terminal domain
    pfam06401
    Location:153 → 364
    Alpha-2-MRAP_C; Alpha-2-macroglobulin RAP, C-terminal domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006585.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    63491109..63503659
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_536218.7 → XP_536218.3  alpha-2-macroglobulin receptor-associated protein

    UniProtKB/TrEMBL
    A0A8C0M262, A0A8C0R109, A0A8I3N6H6, A0A8P0NGD3
    Conserved Domains (3) summary
    cd14806
    Location:65 → 72
    RAP_D1; 3-helical coiled coil [structural motif]
    pfam06400
    Location:29 → 137
    Alpha-2-MRAP_N; Alpha-2-macroglobulin RAP, N-terminal domain
    pfam06401
    Location:153 → 364
    Alpha-2-MRAP_C; Alpha-2-macroglobulin RAP, C-terminal domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials