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TTC14 tetratricopeptide repeat domain 14 [ Canis lupus familiaris (dog) ]

Gene ID: 478641, updated on 17-Aug-2024

Summary

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Official Symbol
TTC14provided by VGNC
Official Full Name
tetratricopeptide repeat domain 14provided by VGNC
Primary source
VGNC:VGNC:47939
See related
Ensembl:ENSCAFG00845018663
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See TTC14 in Genome Data Viewer
Location:
chromosome: 34
Exon count:
12
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 34 NC_051838.1 (13805312..13815660)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 34 NC_006616.4 (17986403..17996753)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 34 NC_049255.1 (14077912..14088267)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 34 NC_049294.1 (13849704..13860048)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 34 NC_049775.1 (13829697..13840041)

Chromosome 34 - NC_051838.1Genomic Context describing neighboring genes Neighboring gene peroxisomal biogenesis factor 5 like Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC111093905 Neighboring gene uncharacterized LOC111093961 Neighboring gene uncharacterized LOC119867492 Neighboring gene U6 spliceosomal RNA Neighboring gene coiled-coil domain 39 molecular ruler complex subunit Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tetratricopeptide repeat protein 14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051838.1 Reference ROS_Cfam_1.0

    Range
    13805312..13815660
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038445636.1 → XP_038301564.1  tetratricopeptide repeat protein 14

    UniProtKB/TrEMBL
    A0A8C0TF48, A0A8I3S3J9
    Related
    ENSCAFP00845025838.1, ENSCAFT00845033015.1
    Conserved Domains (3) summary
    smart00316
    Location:124 → 207
    S1; Ribosomal protein S1-like RNA-binding domain
    COG0457
    Location:290 → 437
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:307 → 335
    TPR; TPR repeat [structural motif]

RNA

  1. XR_005306792.1 RNA Sequence

    Related
    ENSCAFT00845033118.1

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049294.1 Alternate UMICH_Zoey_3.1

    Range
    13849704..13860048
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038519817.1 → XP_038375745.1  tetratricopeptide repeat protein 14

    Conserved Domains (3) summary
    smart00316
    Location:124 → 207
    S1; Ribosomal protein S1-like RNA-binding domain
    COG0457
    Location:290 → 437
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:307 → 335
    TPR; TPR repeat [structural motif]

RNA

  1. XR_005349758.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049775.1 Alternate UNSW_CanFamBas_1.0

    Range
    13829697..13840041
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038647869.1 → XP_038503797.1  tetratricopeptide repeat protein 14

    Conserved Domains (3) summary
    smart00316
    Location:124 → 207
    S1; Ribosomal protein S1-like RNA-binding domain
    COG0457
    Location:290 → 437
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:307 → 335
    TPR; TPR repeat [structural motif]

RNA

  1. XR_005417408.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049255.1 Alternate UU_Cfam_GSD_1.0

    Range
    14077912..14088267
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038583460.1 → XP_038439388.1  tetratricopeptide repeat protein 14

    UniProtKB/TrEMBL
    A0A8C0TF48, A0A8I3S3J9
    Conserved Domains (3) summary
    smart00316
    Location:124 → 207
    S1; Ribosomal protein S1-like RNA-binding domain
    COG0457
    Location:290 → 437
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:307 → 335
    TPR; TPR repeat [structural motif]

RNA

  1. XR_005383753.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006616.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    17986403..17996753
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_535814.7 → XP_535814.2  tetratricopeptide repeat protein 14

    UniProtKB/TrEMBL
    A0A8C0TF48, A0A8I3S3J9
    Conserved Domains (3) summary
    smart00316
    Location:124 → 207
    S1; Ribosomal protein S1-like RNA-binding domain
    COG0457
    Location:290 → 437
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:307 → 335
    TPR; TPR repeat [structural motif]

RNA

  1. XR_002622775.2 RNA Sequence

Nucleotide Protein
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