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IPO11 importin 11 [ Canis lupus familiaris (dog) ]

Gene ID: 478073, updated on 17-Aug-2024

Summary

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Official Symbol
IPO11provided by VGNC
Official Full Name
importin 11provided by VGNC
Primary source
VGNC:VGNC:49760
See related
Ensembl:ENSCAFG00845008856
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See IPO11 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
32
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 2 NC_051806.1 (49215561..49416604)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 2 NC_006584.4 (45748467..45948863)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 2 NC_049223.1 (47927714..48128709)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 2 NC_049262.1 (46284305..46486261)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 2 NC_049743.1 (47071163..47272148)

Chromosome 2 - NC_051806.1Genomic Context describing neighboring genes Neighboring gene kinesin family member 2A Neighboring gene DIM1 rRNA methyltransferase and ribosome maturation factor Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC102153322 Neighboring gene uncharacterized LOC119870027

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nuclear envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
importin-11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051806.1 Reference ROS_Cfam_1.0

    Range
    49215561..49416604
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038659000.1 → XP_038514928.1  importin-11 isoform X2

    UniProtKB/TrEMBL
    A0A8C0Q6X7
    Conserved Domains (2) summary
    COG5657
    Location:10 → 850
    CSE1; CAS/CSE protein involved in chromosome segregation [Cell division and chromosome partitioning]
    sd00044
    Location:426 → 459
    HEAT; HEAT repeat [structural motif]

  2. XM_038658999.1 → XP_038514927.1  importin-11 isoform X1

    UniProtKB/TrEMBL
    A0A8C0Q0V4, A0A8I3N9P4, A0A8P0T2P0
    Related
    ENSCAFP00845012122.1, ENSCAFT00845015598.1
    Conserved Domains (2) summary
    COG5657
    Location:10 → 972
    CSE1; CAS/CSE protein involved in chromosome segregation [Cell division and chromosome partitioning]
    sd00044
    Location:426 → 459
    HEAT; HEAT repeat [structural motif]

RNA

  1. XR_005423196.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049262.1 Alternate UMICH_Zoey_3.1

    Range
    46284305..46486261
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038469895.1 → XP_038325823.1  importin-11 isoform X2

    Conserved Domains (2) summary
    COG5657
    Location:10 → 850
    CSE1; CAS/CSE protein involved in chromosome segregation [Cell division and chromosome partitioning]
    sd00044
    Location:426 → 459
    HEAT; HEAT repeat [structural motif]

  2. XM_038469894.1 → XP_038325822.1  importin-11 isoform X1

    Conserved Domains (2) summary
    COG5657
    Location:10 → 972
    CSE1; CAS/CSE protein involved in chromosome segregation [Cell division and chromosome partitioning]
    sd00044
    Location:426 → 459
    HEAT; HEAT repeat [structural motif]

RNA

  1. XR_005322005.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049743.1 Alternate UNSW_CanFamBas_1.0

    Range
    47071163..47272148
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038594929.1 → XP_038450857.1  importin-11 isoform X2

    Conserved Domains (2) summary
    COG5657
    Location:10 → 850
    CSE1; CAS/CSE protein involved in chromosome segregation [Cell division and chromosome partitioning]
    sd00044
    Location:426 → 459
    HEAT; HEAT repeat [structural motif]

  2. XM_038594928.1 → XP_038450856.1  importin-11 isoform X1

    Conserved Domains (2) summary
    COG5657
    Location:10 → 972
    CSE1; CAS/CSE protein involved in chromosome segregation [Cell division and chromosome partitioning]
    sd00044
    Location:426 → 459
    HEAT; HEAT repeat [structural motif]

RNA

  1. XR_005390169.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049223.1 Alternate UU_Cfam_GSD_1.0

    Range
    47927714..48128709
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038530704.1 → XP_038386632.1  importin-11 isoform X2

    UniProtKB/TrEMBL
    A0A8C0Q6X7
    Conserved Domains (2) summary
    COG5657
    Location:10 → 850
    CSE1; CAS/CSE protein involved in chromosome segregation [Cell division and chromosome partitioning]
    sd00044
    Location:426 → 459
    HEAT; HEAT repeat [structural motif]

  2. XM_038530703.1 → XP_038386631.1  importin-11 isoform X1

    UniProtKB/TrEMBL
    A0A8C0Q0V4, A0A8I3N9P4, A0A8P0T2P0
    Conserved Domains (2) summary
    COG5657
    Location:10 → 972
    CSE1; CAS/CSE protein involved in chromosome segregation [Cell division and chromosome partitioning]
    sd00044
    Location:426 → 459
    HEAT; HEAT repeat [structural motif]

RNA

  1. XR_005355599.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006584.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    45748467..45948863
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005617430.4 → XP_005617487.1  importin-11 isoform X2

    UniProtKB/TrEMBL
    A0A8C0Q6X7
    Conserved Domains (2) summary
    COG5657
    Location:10 → 850
    CSE1; CAS/CSE protein involved in chromosome segregation [Cell division and chromosome partitioning]
    sd00044
    Location:426 → 459
    HEAT; HEAT repeat [structural motif]

  2. XM_535251.7 → XP_535251.2  importin-11 isoform X1

    See identical proteins and their annotated locations for XP_535251.2

    UniProtKB/TrEMBL
    A0A8C0Q0V4, A0A8I3N9P4, A0A8P0T2P0
    Conserved Domains (2) summary
    COG5657
    Location:10 → 972
    CSE1; CAS/CSE protein involved in chromosome segregation [Cell division and chromosome partitioning]
    sd00044
    Location:426 → 459
    HEAT; HEAT repeat [structural motif]

RNA

  1. XR_002619162.2 RNA Sequence

Nucleotide Protein
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