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LDHB lactate dehydrogenase B [ Canis lupus familiaris (dog) ]

Gene ID: 477675, updated on 5-Mar-2024

Summary

Gene symbol
LDHB
Gene description
lactate dehydrogenase B
See related
Ensembl:ENSCAFG00845014696
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
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Genomic context

See LDHB in Genome Data Viewer
Location:
chromosome: 27
Exon count:
8
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (25693648..25716172)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (20864321..20886793, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (21035083..21057566, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (25492290..25514750)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (25515724..25538195)

Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily C member 9 Neighboring gene potassium inwardly rectifying channel subfamily J member 8 Neighboring gene glycogen synthase 2 Neighboring gene spexin hormone

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-lactate dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in carboxylic acid metabolic process IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
L-lactate dehydrogenase B chain
NP_001239093.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001252164.1NP_001239093.1  L-lactate dehydrogenase B chain

    See identical proteins and their annotated locations for NP_001239093.1

    Status: VALIDATED

    Source sequence(s)
    CO584462, DN434255, DN876290
    UniProtKB/TrEMBL
    A0A8C0K415, A0A8C0RBP6, A0A8C0Z6I0, A0A8I3NY38
    Related
    ENSCAFP00845020730.1, ENSCAFT00845026294.1
    Conserved Domains (1) summary
    cd05293
    Location:20330
    LDH_1; A subgroup of L-lactate dehydrogenases

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051831.1 Reference ROS_Cfam_1.0

    Range
    25693648..25716172
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049287.1 Alternate UMICH_Zoey_3.1

    Range
    25492290..25514750
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

    Range
    25515724..25538195
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

    Range
    21035083..21057566 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    20864321..20886793 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)