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EIF4B eukaryotic translation initiation factor 4B [ Canis lupus familiaris (dog) ]

Gene ID: 477600, updated on 17-Aug-2024

Summary

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Official Symbol
EIF4Bprovided by VGNC
Official Full Name
eukaryotic translation initiation factor 4Bprovided by VGNC
Primary source
VGNC:VGNC:40282
See related
Ensembl:ENSCAFG00845023395
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See EIF4B in Genome Data Viewer
Location:
chromosome: 27
Exon count:
15
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (2119865..2151670, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (44101792..44134056)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (44500659..44532693)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (2138361..2168502, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (2122915..2154675, complement)

Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene SPRY domain containing 3 Neighboring gene uncharacterized LOC111092793 Neighboring gene uncharacterized LOC102156972 Neighboring gene tensin 2 Neighboring gene uncharacterized LOC102156665 Neighboring gene keratin 18

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 4B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051831.1 Reference ROS_Cfam_1.0

    Range
    2119865..2151670 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038438101.1 → XP_038294029.1  eukaryotic translation initiation factor 4B isoform X4

    UniProtKB/TrEMBL
    A0A8C0PPY6, A0A8I3PJS8
    Related
    ENSCAFP00845032580.1, ENSCAFT00845041555.1
    Conserved Domains (3) summary
    PRK12678
    Location:158 → 273
    PRK12678; transcription termination factor Rho; Provisional
    PTZ00108
    Location:372 → 608
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd12402
    Location:94 → 175
    RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

  2. XM_038438100.1 → XP_038294028.1  eukaryotic translation initiation factor 4B isoform X3

    UniProtKB/TrEMBL
    A0A8C0PPY6, A0A8I3PJS8
    Conserved Domains (3) summary
    PRK12678
    Location:158 → 273
    PRK12678; transcription termination factor Rho; Provisional
    PTZ00108
    Location:372 → 609
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd12402
    Location:94 → 175
    RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

  3. XM_038438099.1 → XP_038294027.1  eukaryotic translation initiation factor 4B isoform X2

    UniProtKB/TrEMBL
    A0A8C0PI66, A0A8C0PPY6, A0A8I3PJS8, A0A8I3S3N6
    Related
    ENSCAFP00845032509.1, ENSCAFT00845041459.1
    Conserved Domains (3) summary
    PRK12678
    Location:158 → 273
    PRK12678; transcription termination factor Rho; Provisional
    PTZ00108
    Location:372 → 613
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd12402
    Location:94 → 175
    RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

  4. XM_038438098.1 → XP_038294026.1  eukaryotic translation initiation factor 4B isoform X1

    UniProtKB/TrEMBL
    A0A8C0PPY6, A0A8I3PJS8, A0A8P0SCF6
    Conserved Domains (3) summary
    PRK12678
    Location:158 → 273
    PRK12678; transcription termination factor Rho; Provisional
    PTZ00108
    Location:372 → 614
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd12402
    Location:94 → 175
    RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049287.1 Alternate UMICH_Zoey_3.1

    Range
    2138361..2168502 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038512791.1 → XP_038368719.1  eukaryotic translation initiation factor 4B isoform X4

    Conserved Domains (3) summary
    PRK12678
    Location:158 → 273
    PRK12678; transcription termination factor Rho; Provisional
    PTZ00108
    Location:372 → 608
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd12402
    Location:94 → 175
    RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

  2. XM_038512790.1 → XP_038368718.1  eukaryotic translation initiation factor 4B isoform X3

    Conserved Domains (3) summary
    PRK12678
    Location:158 → 273
    PRK12678; transcription termination factor Rho; Provisional
    PTZ00108
    Location:372 → 609
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd12402
    Location:94 → 175
    RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

  3. XM_038512789.1 → XP_038368717.1  eukaryotic translation initiation factor 4B isoform X2

    Conserved Domains (3) summary
    PRK12678
    Location:158 → 273
    PRK12678; transcription termination factor Rho; Provisional
    PTZ00108
    Location:372 → 613
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd12402
    Location:94 → 175
    RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

  4. XM_038512788.1 → XP_038368716.1  eukaryotic translation initiation factor 4B isoform X1

    Conserved Domains (3) summary
    PRK12678
    Location:158 → 273
    PRK12678; transcription termination factor Rho; Provisional
    PTZ00108
    Location:372 → 614
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd12402
    Location:94 → 175
    RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

    Range
    2122915..2154675 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038640556.1 → XP_038496484.1  eukaryotic translation initiation factor 4B isoform X4

    Conserved Domains (3) summary
    PRK12678
    Location:158 → 273
    PRK12678; transcription termination factor Rho; Provisional
    PTZ00108
    Location:372 → 608
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd12402
    Location:94 → 175
    RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

  2. XM_038640555.1 → XP_038496483.1  eukaryotic translation initiation factor 4B isoform X3

    Conserved Domains (3) summary
    PRK12678
    Location:158 → 273
    PRK12678; transcription termination factor Rho; Provisional
    PTZ00108
    Location:372 → 609
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd12402
    Location:94 → 175
    RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

  3. XM_038640554.1 → XP_038496482.1  eukaryotic translation initiation factor 4B isoform X2

    Conserved Domains (3) summary
    PRK12678
    Location:158 → 273
    PRK12678; transcription termination factor Rho; Provisional
    PTZ00108
    Location:372 → 613
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd12402
    Location:94 → 175
    RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

  4. XM_038640553.1 → XP_038496481.1  eukaryotic translation initiation factor 4B isoform X1

    Conserved Domains (3) summary
    PRK12678
    Location:158 → 273
    PRK12678; transcription termination factor Rho; Provisional
    PTZ00108
    Location:372 → 614
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd12402
    Location:94 → 175
    RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

    Range
    44500659..44532693
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038577748.1 → XP_038433676.1  eukaryotic translation initiation factor 4B isoform X1

    UniProtKB/TrEMBL
    A0A8C0PPY6, A0A8I3PJS8, A0A8P0SCF6
    Conserved Domains (3) summary
    PRK12678
    Location:158 → 273
    PRK12678; transcription termination factor Rho; Provisional
    PTZ00108
    Location:372 → 614
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd12402
    Location:94 → 175
    RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

  2. XM_038577749.1 → XP_038433677.1  eukaryotic translation initiation factor 4B isoform X2

    UniProtKB/TrEMBL
    A0A8C0PI66, A0A8C0PPY6, A0A8I3PJS8, A0A8I3S3N6
    Conserved Domains (3) summary
    PRK12678
    Location:158 → 273
    PRK12678; transcription termination factor Rho; Provisional
    PTZ00108
    Location:372 → 613
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd12402
    Location:94 → 175
    RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

  3. XM_038577751.1 → XP_038433679.1  eukaryotic translation initiation factor 4B isoform X3

    UniProtKB/TrEMBL
    A0A8C0PPY6, A0A8I3PJS8
    Conserved Domains (3) summary
    PRK12678
    Location:158 → 273
    PRK12678; transcription termination factor Rho; Provisional
    PTZ00108
    Location:372 → 609
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd12402
    Location:94 → 175
    RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

  4. XM_038577752.1 → XP_038433680.1  eukaryotic translation initiation factor 4B isoform X4

    UniProtKB/TrEMBL
    A0A8C0PPY6, A0A8I3PJS8
    Conserved Domains (3) summary
    PRK12678
    Location:158 → 273
    PRK12678; transcription termination factor Rho; Provisional
    PTZ00108
    Location:372 → 608
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd12402
    Location:94 → 175
    RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    44101792..44134056
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005636787.4 → XP_005636844.1  eukaryotic translation initiation factor 4B isoform X1

    UniProtKB/TrEMBL
    A0A8C0PPY6, A0A8I3PJS8, A0A8P0SCF6
    Conserved Domains (3) summary
    PRK12678
    Location:158 → 273
    PRK12678; transcription termination factor Rho; Provisional
    PTZ00108
    Location:372 → 614
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd12402
    Location:94 → 175
    RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

  2. XM_005636788.4 → XP_005636845.1  eukaryotic translation initiation factor 4B isoform X2

    UniProtKB/TrEMBL
    A0A8C0PI66, A0A8C0PPY6, A0A8I3PJS8, A0A8I3S3N6
    Conserved Domains (3) summary
    PRK12678
    Location:158 → 273
    PRK12678; transcription termination factor Rho; Provisional
    PTZ00108
    Location:372 → 613
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd12402
    Location:94 → 175
    RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

  3. XM_005636789.4 → XP_005636846.1  eukaryotic translation initiation factor 4B isoform X3

    UniProtKB/TrEMBL
    A0A8C0PPY6, A0A8I3PJS8
    Conserved Domains (3) summary
    PRK12678
    Location:158 → 273
    PRK12678; transcription termination factor Rho; Provisional
    PTZ00108
    Location:372 → 609
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd12402
    Location:94 → 175
    RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins

  4. XM_853812.6 → XP_858905.2  eukaryotic translation initiation factor 4B isoform X4

    UniProtKB/TrEMBL
    A0A8C0PPY6, A0A8I3PJS8
    Conserved Domains (3) summary
    PRK12678
    Location:158 → 273
    PRK12678; transcription termination factor Rho; Provisional
    PTZ00108
    Location:372 → 608
    PTZ00108; DNA topoisomerase 2-like protein; Provisional
    cd12402
    Location:94 → 175
    RRM_eIF4B; RNA recognition motif (RRM) found in eukaryotic translation initiation factor 4B (eIF-4B) and similar proteins
Nucleotide Protein
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