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UFM1 ubiquitin fold modifier 1 [ Canis lupus familiaris (dog) ]

Gene ID: 477297, updated on 17-Aug-2024

Summary

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Official Symbol
UFM1provided by VGNC
Official Full Name
ubiquitin fold modifier 1provided by VGNC
Primary source
VGNC:VGNC:54385
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See UFM1 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
8
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 25 NC_051829.1 (2626565..2645488, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 25 NC_006607.4 (2623588..2642507, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 25 NC_049246.1 (2591732..2610662, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 25 NC_049285.1 (2525768..2544679, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 25 NC_049766.1 (2520179..2540424, complement)

Chromosome 25 - NC_051829.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S19-like Neighboring gene uncharacterized LOC111092433 Neighboring gene uncharacterized LOC111092432 Neighboring gene uncharacterized LOC111092431 Neighboring gene small nucleolar RNA SNORA52

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein K69-linked ufmylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin fold modifier 1; ubiquitin-fold modifier 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051829.1 Reference ROS_Cfam_1.0

    Range
    2626565..2645488 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038434749.1 → XP_038290677.1  ubiquitin-fold modifier 1 isoform X2

    Conserved Domains (1) summary
    cl28922
    Location:4 → 64
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

  2. XM_038434748.1 → XP_038290676.1  ubiquitin-fold modifier 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0QHL4
    Conserved Domains (1) summary
    cd01766
    Location:4 → 78
    Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

  3. XM_038434750.1 → XP_038290678.1  ubiquitin-fold modifier 1 isoform X3

    Conserved Domains (1) summary
    cl28922
    Location:4 → 63
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

  4. XM_038434747.1 → XP_038290675.1  ubiquitin-fold modifier 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0QHL4
    Conserved Domains (1) summary
    cd01766
    Location:4 → 78
    Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

  5. XM_038434746.1 → XP_038290674.1  ubiquitin-fold modifier 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0QHL4
    Conserved Domains (1) summary
    cd01766
    Location:4 → 78
    Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

RNA

  1. XR_005301476.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049285.1 Alternate UMICH_Zoey_3.1

    Range
    2525768..2544679 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038509743.1 → XP_038365671.1  ubiquitin-fold modifier 1 isoform X2

    Conserved Domains (1) summary
    cl28922
    Location:4 → 64
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

  2. XM_038509742.1 → XP_038365670.1  ubiquitin-fold modifier 1 isoform X1

    Conserved Domains (1) summary
    cd01766
    Location:4 → 78
    Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

  3. XM_038509744.1 → XP_038365672.1  ubiquitin-fold modifier 1 isoform X3

    Conserved Domains (1) summary
    cl28922
    Location:4 → 63
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

  4. XM_038509741.1 → XP_038365669.1  ubiquitin-fold modifier 1 isoform X1

    Conserved Domains (1) summary
    cd01766
    Location:4 → 78
    Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

  5. XM_038509740.1 → XP_038365668.1  ubiquitin-fold modifier 1 isoform X1

    Conserved Domains (1) summary
    cd01766
    Location:4 → 78
    Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

RNA

  1. XR_005344478.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049766.1 Alternate UNSW_CanFamBas_1.0

    Range
    2520179..2540424 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038637439.1 → XP_038493367.1  ubiquitin-fold modifier 1 isoform X2

    Conserved Domains (1) summary
    cl28922
    Location:4 → 64
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

  2. XM_038637438.1 → XP_038493366.1  ubiquitin-fold modifier 1 isoform X1

    Conserved Domains (1) summary
    cd01766
    Location:4 → 78
    Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

  3. XM_038637440.1 → XP_038493368.1  ubiquitin-fold modifier 1 isoform X3

    Conserved Domains (1) summary
    cl28922
    Location:4 → 63
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

  4. XM_038637437.1 → XP_038493365.1  ubiquitin-fold modifier 1 isoform X1

    Conserved Domains (1) summary
    cd01766
    Location:4 → 78
    Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

  5. XM_038637436.1 → XP_038493364.1  ubiquitin-fold modifier 1 isoform X1

    Conserved Domains (1) summary
    cd01766
    Location:4 → 78
    Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

RNA

  1. XR_005412201.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049246.1 Alternate UU_Cfam_GSD_1.0

    Range
    2591732..2610662 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038573174.1 → XP_038429102.1  ubiquitin-fold modifier 1 isoform X2

    Conserved Domains (1) summary
    cl28922
    Location:4 → 64
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

  2. XM_038573172.1 → XP_038429100.1  ubiquitin-fold modifier 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0QHL4
    Conserved Domains (1) summary
    cd01766
    Location:4 → 78
    Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

  3. XM_038573175.1 → XP_038429103.1  ubiquitin-fold modifier 1 isoform X3

    Conserved Domains (1) summary
    cl28922
    Location:4 → 63
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

  4. XM_038573171.1 → XP_038429099.1  ubiquitin-fold modifier 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0QHL4
    Conserved Domains (1) summary
    cd01766
    Location:4 → 78
    Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

  5. XM_038573170.1 → XP_038429098.1  ubiquitin-fold modifier 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0QHL4
    Conserved Domains (1) summary
    cd01766
    Location:4 → 78
    Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

RNA

  1. XR_005378310.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006607.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    2623588..2642507 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005635420.4 → XP_005635477.2  ubiquitin-fold modifier 1 isoform X2

    Conserved Domains (1) summary
    cl28922
    Location:4 → 64
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

  2. XM_022410013.2 → XP_022265721.2  ubiquitin-fold modifier 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0QHL4
    Conserved Domains (1) summary
    cd01766
    Location:4 → 78
    Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

  3. XM_022410014.2 → XP_022265722.2  ubiquitin-fold modifier 1 isoform X3

    Conserved Domains (1) summary
    cl28922
    Location:4 → 63
    Ubiquitin_like_fold; Beta-grasp ubiquitin-like fold

  4. XM_022410012.2 → XP_022265720.2  ubiquitin-fold modifier 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0QHL4
    Conserved Domains (1) summary
    cd01766
    Location:4 → 78
    Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

  5. XM_534489.7 → XP_534489.4  ubiquitin-fold modifier 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0QHL4
    Conserved Domains (1) summary
    cd01766
    Location:4 → 78
    Ubl_UFM1; ubiquitin-like (Ubl) domain found in ubiquitin fold modifier 1 (UFM1)

RNA

  1. XR_005314794.1 RNA Sequence

Nucleotide Protein
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