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LOC477273 serine/threonine-protein phosphatase 4 regulatory subunit 1-like [ Canis lupus familiaris (dog) ]

Gene ID: 477273, updated on 22-Jan-2024

Summary

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Gene symbol
LOC477273
Gene description
serine/threonine-protein phosphatase 4 regulatory subunit 1-like
See related
Ensembl:ENSCAFG00845013178
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
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Genomic context

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See LOC477273 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
23
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 24 NC_051828.1 (43891880..43973551, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 24 NC_006606.4 (42272940..42354553, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 24 NC_049245.1 (43773636..43855267, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 24 NC_049284.1 (42994371..43075964, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 24 NC_049765.1 (43115169..43196798, complement)

Chromosome 24 - NC_051828.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119865703 Neighboring gene ankyrin repeat domain 60 Neighboring gene RAB22A, member RAS oncogene family Neighboring gene uncharacterized LOC119865704 Neighboring gene uncharacterized LOC119865705

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein phosphatase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein phosphatase 4 regulatory subunit 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051828.1 Reference ROS_Cfam_1.0

    Range
    43891880..43973551 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038434199.1 → XP_038290127.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X2

    UniProtKB/TrEMBL
    A0A8I3NRZ0, A0A8P0NDV9
    Conserved Domains (2) summary
    sd00044
    Location:133 → 156
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:453 → 479
    WRNPLPNID; Putative WW-binding domain and destruction box

  2. XM_038434203.1 → XP_038290131.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X6

    UniProtKB/TrEMBL
    A0A8I3NRZ0, A0A8P0NDV9
    Conserved Domains (2) summary
    sd00044
    Location:47 → 70
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:367 → 393
    WRNPLPNID; Putative WW-binding domain and destruction box

  3. XM_038434201.1 → XP_038290129.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X4

    UniProtKB/TrEMBL
    A0A8I3NRZ0, A0A8P0NDV9
    Related
    ENSCAFP00845018546.1, ENSCAFT00845023629.1
    Conserved Domains (2) summary
    sd00044
    Location:122 → 145
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:442 → 468
    WRNPLPNID; Putative WW-binding domain and destruction box

  4. XM_038434202.1 → XP_038290130.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X5

    UniProtKB/TrEMBL
    A0A8I3NRZ0, A0A8P0NDV9
    Conserved Domains (2) summary
    sd00044
    Location:136 → 165
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:434 → 460
    WRNPLPNID; Putative WW-binding domain and destruction box

  5. XM_038434200.1 → XP_038290128.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X3

    UniProtKB/TrEMBL
    A0A8C0T0G8, A0A8I3NRV5, A0A8I3NRZ0, A0A8P0NDV9
    Related
    ENSCAFP00845018498.1, ENSCAFT00845023562.1
    Conserved Domains (2) summary
    sd00044
    Location:136 → 165
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:456 → 482
    WRNPLPNID; Putative WW-binding domain and destruction box

  6. XM_038434198.1 → XP_038290126.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X1

    UniProtKB/TrEMBL
    A0A8I3NRZ0, A0A8P0NDV9
    Conserved Domains (2) summary
    sd00044
    Location:136 → 165
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:456 → 482
    WRNPLPNID; Putative WW-binding domain and destruction box

  7. XM_038434205.1 → XP_038290133.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X8

    UniProtKB/TrEMBL
    A0A8I3NRZ0, A0A8P0NDV9
    Conserved Domains (2) summary
    sd00044
    Location:48 → 81
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:333 → 359
    WRNPLPNID; Putative WW-binding domain and destruction box

  8. XM_038434204.1 → XP_038290132.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X7

    UniProtKB/TrEMBL
    A0A8I3NRZ0, A0A8P0NDV9
    Conserved Domains (2) summary
    sd00044
    Location:136 → 165
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:456 → 482
    WRNPLPNID; Putative WW-binding domain and destruction box

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049284.1 Alternate UMICH_Zoey_3.1

    Range
    42994371..43075964 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038509356.1 → XP_038365284.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X2

    Conserved Domains (2) summary
    sd00044
    Location:133 → 156
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:453 → 479
    WRNPLPNID; Putative WW-binding domain and destruction box

  2. XM_038509360.1 → XP_038365288.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X6

    Conserved Domains (2) summary
    sd00044
    Location:47 → 70
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:367 → 393
    WRNPLPNID; Putative WW-binding domain and destruction box

  3. XM_038509358.1 → XP_038365286.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X4

    Conserved Domains (2) summary
    sd00044
    Location:122 → 145
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:442 → 468
    WRNPLPNID; Putative WW-binding domain and destruction box

  4. XM_038509359.1 → XP_038365287.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X5

    Conserved Domains (2) summary
    sd00044
    Location:136 → 165
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:434 → 460
    WRNPLPNID; Putative WW-binding domain and destruction box

  5. XM_038509357.1 → XP_038365285.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X3

    Conserved Domains (2) summary
    sd00044
    Location:136 → 165
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:456 → 482
    WRNPLPNID; Putative WW-binding domain and destruction box

  6. XM_038509355.1 → XP_038365283.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X1

    Conserved Domains (2) summary
    sd00044
    Location:136 → 165
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:456 → 482
    WRNPLPNID; Putative WW-binding domain and destruction box

  7. XM_038509362.1 → XP_038365290.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X8

    Conserved Domains (2) summary
    sd00044
    Location:48 → 81
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:333 → 359
    WRNPLPNID; Putative WW-binding domain and destruction box

  8. XM_038509361.1 → XP_038365289.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X7

    Conserved Domains (2) summary
    sd00044
    Location:136 → 165
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:456 → 482
    WRNPLPNID; Putative WW-binding domain and destruction box

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049765.1 Alternate UNSW_CanFamBas_1.0

    Range
    43115169..43196798 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038636981.1 → XP_038492909.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X2

  2. XM_038636985.1 → XP_038492913.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X6

    Conserved Domains (2) summary
    sd00044
    Location:47 → 70
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:367 → 393
    WRNPLPNID; Putative WW-binding domain and destruction box

  3. XM_038636983.1 → XP_038492911.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X4

  4. XM_038636984.1 → XP_038492912.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X5

  5. XM_038636982.1 → XP_038492910.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X3

  6. XM_038636980.1 → XP_038492908.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X1

  7. XM_038636987.1 → XP_038492915.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X8

    Conserved Domains (2) summary
    sd00044
    Location:48 → 81
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:333 → 359
    WRNPLPNID; Putative WW-binding domain and destruction box

  8. XM_038636986.1 → XP_038492914.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X7

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049245.1 Alternate UU_Cfam_GSD_1.0

    Range
    43773636..43855267 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038572702.1 → XP_038428630.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X2

    UniProtKB/TrEMBL
    A0A8I3NRZ0, A0A8P0NDV9
    Conserved Domains (2) summary
    sd00044
    Location:133 → 156
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:453 → 479
    WRNPLPNID; Putative WW-binding domain and destruction box

  2. XM_038572706.1 → XP_038428634.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X6

    UniProtKB/TrEMBL
    A0A8I3NRZ0, A0A8P0NDV9
    Conserved Domains (2) summary
    sd00044
    Location:47 → 70
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:367 → 393
    WRNPLPNID; Putative WW-binding domain and destruction box

  3. XM_038572704.1 → XP_038428632.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X4

    UniProtKB/TrEMBL
    A0A8I3NRZ0, A0A8P0NDV9
    Conserved Domains (2) summary
    sd00044
    Location:122 → 145
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:442 → 468
    WRNPLPNID; Putative WW-binding domain and destruction box

  4. XM_038572705.1 → XP_038428633.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X5

    UniProtKB/TrEMBL
    A0A8I3NRZ0, A0A8P0NDV9
    Conserved Domains (2) summary
    sd00044
    Location:136 → 165
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:434 → 460
    WRNPLPNID; Putative WW-binding domain and destruction box

  5. XM_038572703.1 → XP_038428631.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X3

    UniProtKB/TrEMBL
    A0A8C0T0G8, A0A8I3NRV5, A0A8I3NRZ0, A0A8P0NDV9
    Conserved Domains (2) summary
    sd00044
    Location:136 → 165
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:456 → 482
    WRNPLPNID; Putative WW-binding domain and destruction box

  6. XM_038572701.1 → XP_038428629.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X1

    UniProtKB/TrEMBL
    A0A8I3NRZ0, A0A8P0NDV9
    Conserved Domains (2) summary
    sd00044
    Location:136 → 165
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:456 → 482
    WRNPLPNID; Putative WW-binding domain and destruction box

  7. XM_038572708.1 → XP_038428636.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X8

    UniProtKB/TrEMBL
    A0A8I3NRZ0, A0A8P0NDV9
    Conserved Domains (2) summary
    sd00044
    Location:48 → 81
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:333 → 359
    WRNPLPNID; Putative WW-binding domain and destruction box

  8. XM_038572707.1 → XP_038428635.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X7

    UniProtKB/TrEMBL
    A0A8I3NRZ0, A0A8P0NDV9
    Conserved Domains (2) summary
    sd00044
    Location:136 → 165
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:456 → 482
    WRNPLPNID; Putative WW-binding domain and destruction box

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006606.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    42272940..42354553 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038457635.1 → XP_038313563.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X2

    UniProtKB/TrEMBL
    A0A8I3NRZ0, A0A8P0NDV9
    Conserved Domains (2) summary
    sd00044
    Location:133 → 156
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:453 → 479
    WRNPLPNID; Putative WW-binding domain and destruction box

  2. XM_038457638.1 → XP_038313566.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X6

    UniProtKB/TrEMBL
    A0A8I3NRZ0, A0A8P0NDV9
    Conserved Domains (2) summary
    sd00044
    Location:47 → 70
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:367 → 393
    WRNPLPNID; Putative WW-binding domain and destruction box

  3. XM_038457636.1 → XP_038313564.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X4

    UniProtKB/TrEMBL
    A0A8I3NRZ0, A0A8P0NDV9
    Conserved Domains (2) summary
    sd00044
    Location:122 → 145
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:442 → 468
    WRNPLPNID; Putative WW-binding domain and destruction box

  4. XM_038457637.1 → XP_038313565.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X5

    UniProtKB/TrEMBL
    A0A8I3NRZ0, A0A8P0NDV9
    Conserved Domains (2) summary
    sd00044
    Location:136 → 165
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:434 → 460
    WRNPLPNID; Putative WW-binding domain and destruction box

  5. XM_022408833.2 → XP_022264541.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X3

    UniProtKB/TrEMBL
    A0A8C0T0G8, A0A8I3NRV5, A0A8I3NRZ0, A0A8P0NDV9
    Conserved Domains (2) summary
    sd00044
    Location:136 → 165
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:456 → 482
    WRNPLPNID; Putative WW-binding domain and destruction box

  6. XM_038457634.1 → XP_038313562.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X1

    UniProtKB/TrEMBL
    A0A8I3NRZ0, A0A8P0NDV9
    Conserved Domains (2) summary
    sd00044
    Location:136 → 165
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:456 → 482
    WRNPLPNID; Putative WW-binding domain and destruction box

  7. XM_038457641.1 → XP_038313569.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X8

    UniProtKB/TrEMBL
    A0A8I3NRZ0, A0A8P0NDV9
    Conserved Domains (2) summary
    sd00044
    Location:48 → 81
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:333 → 359
    WRNPLPNID; Putative WW-binding domain and destruction box

  8. XM_038457639.1 → XP_038313567.1  serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X7

    UniProtKB/TrEMBL
    A0A8I3NRZ0, A0A8P0NDV9
    Conserved Domains (2) summary
    sd00044
    Location:136 → 165
    HEAT; HEAT repeat [structural motif]
    pfam15017
    Location:456 → 482
    WRNPLPNID; Putative WW-binding domain and destruction box
Nucleotide Protein
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