SLC17A7 solute carrier family 17 member 7 [Canis lupus familiaris (dog)] - Gene

Summary

Official Symbol: SLC17A7provided by VGNC
Official Full Name: solute carrier family 17 member 7provided by VGNC
Primary source: VGNC:VGNC:46252
See related: Ensembl:ENSCAFG00845024908
Gene type: protein coding
RefSeq status: MODEL
Organism: Canis lupus familiaris (sub-species: familiaris)
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 1

Exon count:: 12

Annotation release	Status	Assembly	Chr	Location
106	current	ROS_Cfam_1.0 (GCF_014441545.1)	1	NC_051805.1 (107574355..107584513)
106	current	Dog10K_Boxer_Tasha (GCF_000002285.5)	1	NC_006583.4 (106637561..106647714)
106	current	UU_Cfam_GSD_1.0 (GCF_011100685.1)	1	NC_049222.1 (107730574..107740729)
106	current	UMICH_Zoey_3.1 (GCF_005444595.1)	1	NC_049261.1 (107247363..107257512)
106	current	UNSW_CanFamBas_1.0 (GCF_013276365.1)	1	NC_049742.1 (106889697..106900075)

Chromosome 1 - NC_051805.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

HSCZSA032 (e-PCR)
- UniSTS:47649

Slc17a7 (e-PCR), detects polymorphism
- UniSTS:547911

G42190 (e-PCR)
- UniSTS:105108

MARC_9701-9702:996688535:1 (e-PCR)
- UniSTS:269974

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables L-glutamate transmembrane transporter activity	IEA Inferred from Electronic Annotation more info	PubMed
enables neurotransmitter transmembrane transporter activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in monoatomic anion transport	IEA Inferred from Electronic Annotation more info	PubMed
involved_in neurotransmitter loading into synaptic vesicle	IEA Inferred from Electronic Annotation more info	PubMed
involved_in regulation of synapse structure or activity	IEA Inferred from Electronic Annotation more info	PubMed
involved_in synaptic transmission, glutamatergic	IEA Inferred from Electronic Annotation more info	PubMed
involved_in transmembrane transport	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in excitatory synapse	IEA Inferred from Electronic Annotation more info	PubMed
located_in synaptic vesicle membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: vesicular glutamate transporter 1

Names: solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

NC_051805.1 Reference ROS_Cfam_1.0

Range

107574355..107584513

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038653772.1 → XP_038509700.1 vesicular glutamate transporter 1

UniProtKB/TrEMBL

A0A8C0LKF4, A0A8C0T402, A0A8I3PN97, A0A8I3PTA5, A0A8P0TID5

Related

ENSCAFP00845034447.1, ENSCAFT00845043955.1

Conserved Domains (1) summary

cd17382
Location:66 → 490

MFS_SLC17A6_7_8_VGluT; Solute carrier family 17 members 6, 7, and 8 (also called Vesicular glutamate transporters) of the Major Facilitator Superfamily of transporters

Alternate UMICH_Zoey_3.1

Genomic

NC_049261.1 Alternate UMICH_Zoey_3.1

Range

107247363..107257512

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038465048.1 → XP_038320976.1 vesicular glutamate transporter 1

Conserved Domains (1) summary

cd17382
Location:66 → 490

MFS_SLC17A6_7_8_VGluT; Solute carrier family 17 members 6, 7, and 8 (also called Vesicular glutamate transporters) of the Major Facilitator Superfamily of transporters

Alternate UNSW_CanFamBas_1.0

Genomic

NC_049742.1 Alternate UNSW_CanFamBas_1.0

Range

106889697..106900075

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038589847.1 → XP_038445775.1 vesicular glutamate transporter 1

Conserved Domains (1) summary

cd17382
Location:66 → 490

MFS_SLC17A6_7_8_VGluT; Solute carrier family 17 members 6, 7, and 8 (also called Vesicular glutamate transporters) of the Major Facilitator Superfamily of transporters

Alternate UU_Cfam_GSD_1.0

Genomic

NC_049222.1 Alternate UU_Cfam_GSD_1.0

Range

107730574..107740729

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038525643.1 → XP_038381571.1 vesicular glutamate transporter 1

UniProtKB/TrEMBL

A0A8C0LKF4, A0A8C0T402, A0A8I3PN97, A0A8I3PTA5, A0A8P0TID5

Conserved Domains (1) summary

cd17382
Location:66 → 490

MFS_SLC17A6_7_8_VGluT; Solute carrier family 17 members 6, 7, and 8 (also called Vesicular glutamate transporters) of the Major Facilitator Superfamily of transporters

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

Range

106637561..106647714

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_533621.8 → XP_533621.4 vesicular glutamate transporter 1

UniProtKB/TrEMBL

A0A8C0LKF4, A0A8C0T402, A0A8I3PN97, A0A8I3PTA5, A0A8P0TID5

Conserved Domains (1) summary

cd17382
Location:66 → 490

MFS_SLC17A6_7_8_VGluT; Solute carrier family 17 members 6, 7, and 8 (also called Vesicular glutamate transporters) of the Major Facilitator Superfamily of transporters