U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TVAGG3_0693890 glycine-, glutamate-, thienylcyclohexylpiperidine-binding protein family [ Trichomonas vaginalis G3 ]

Gene ID: 4762793, updated on 17-May-2024

Summary

Go to the top of the page Help
Gene symbol
TVAGG3_0693890
Gene description
glycine-, glutamate-, thienylcyclohexylpiperidine-binding protein family
Locus tag
TVAGG3_0693890
See related
TrichDB:TVAGG3_0693890; VEuPathDB:TVAGG3_0693890
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Trichomonas vaginalis G3 (strain: G3, nat-host: Homo sapiens, culture-collection: ATCC:PRA-98)
Lineage
Eukaryota; Metamonada; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas
Old locus tag
TVAG_2v0693890
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TVAGG3_0693890 in Genome Data Viewer
Location:
chromosome: III
Exon count:
1
Sequence:
Chromosome: III; NC_067205.1 (13204034..13206069)

Chromosome III - NC_067205.1Genomic Context describing neighboring genes Neighboring gene STKc PLK domain-containing protein Neighboring gene hypothetical protein Neighboring gene histidine acid phosphatase Neighboring gene foie gras family

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_067205.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis. Carlton JM, et al. Science, 2007 Jan 12. PMID 17218520, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
glycine-, glutamate-, thienylcyclohexylpiperidine-binding protein family
XP_001317160.1
  • Deepfry function prediction from predicted structure:organic cyclic compound binding protein;eggNOG seed ortholog:5722.XP_001317160.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_067205.1 Reference assembly

    Range
    13204034..13206069
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001317125.1 → XP_001317160.1  glycine-, glutamate-, thienylcyclohexylpiperidine-binding protein family [Trichomonas vaginalis G3]

    See identical proteins and their annotated locations for XP_001317160.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A2EQW3
    Conserved Domains (1) summary
    pfam02151
    Location:172 → 203
    UVR; UvrB/uvrC motif
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials