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DSE dermatan sulfate epimerase [ Canis lupus familiaris (dog) ]

Gene ID: 476271, updated on 17-Aug-2024

Summary

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Official Symbol
DSEprovided by VGNC
Official Full Name
dermatan sulfate epimeraseprovided by VGNC
Primary source
VGNC:VGNC:57341
See related
Ensembl:ENSCAFG00845005500
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See DSE in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (56968684..57049831)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (57582066..57663169)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 1 NC_049222.1 (57340083..57421210)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (56863004..56944320)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (56711289..56792471)

Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119870670 Neighboring gene WD repeat domain 27 Neighboring gene 60S ribosomal protein L21-like Neighboring gene 60S ribosomal protein L31-like Neighboring gene DNA-(apurinic or apyrimidinic site) endonuclease-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chondroitin-glucuronate 5-epimerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dermatan sulfate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dermatan-sulfate epimerase
XP_022274830.1
XP_022274831.1
XP_038321858.1
XP_038321859.1
XP_038321860.1
XP_038321861.1
XP_038321862.1
XP_038321863.1
XP_038382537.1
XP_038382538.1
XP_038382539.1
XP_038382540.1
XP_038382541.1
XP_038382542.1
XP_038394842.1
XP_038394914.1
XP_038395137.1
XP_038446830.1
XP_038446831.1
XP_038446832.1
XP_038446834.1
XP_038446835.1
XP_038446836.1
XP_038510628.1
XP_038510629.1
XP_038510630.1
XP_038510631.1
XP_038510632.1
XP_038510633.1
XP_533477.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051805.1 Reference ROS_Cfam_1.0

    Range
    56968684..57049831
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038654702.1 → XP_038510630.1  dermatan-sulfate epimerase isoform X1

    UniProtKB/TrEMBL
    A0A8C0LA69, A0A8C0Q4B7, A0A8I3MZW8, A0A8P0T8V3

  2. XM_038654701.1 → XP_038510629.1  dermatan-sulfate epimerase isoform X1

    UniProtKB/TrEMBL
    A0A8C0LA69, A0A8C0Q4B7, A0A8I3MZW8, A0A8P0T8V3

  3. XM_038654700.1 → XP_038510628.1  dermatan-sulfate epimerase isoform X1

    UniProtKB/TrEMBL
    A0A8C0LA69, A0A8C0Q4B7, A0A8I3MZW8, A0A8P0T8V3
    Related
    ENSCAFP00845007663.1, ENSCAFT00845009802.1

  4. XM_038654703.1 → XP_038510631.1  dermatan-sulfate epimerase isoform X2

  5. XM_038654704.1 → XP_038510632.1  dermatan-sulfate epimerase isoform X2

  6. XM_038654705.1 → XP_038510633.1  dermatan-sulfate epimerase isoform X3

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049261.1 Alternate UMICH_Zoey_3.1

    Range
    56863004..56944320
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038465932.1 → XP_038321860.1  dermatan-sulfate epimerase isoform X1

  2. XM_038465931.1 → XP_038321859.1  dermatan-sulfate epimerase isoform X1

  3. XM_038465930.1 → XP_038321858.1  dermatan-sulfate epimerase isoform X1

  4. XM_038465933.1 → XP_038321861.1  dermatan-sulfate epimerase isoform X2

  5. XM_038465934.1 → XP_038321862.1  dermatan-sulfate epimerase isoform X2

  6. XM_038465935.1 → XP_038321863.1  dermatan-sulfate epimerase isoform X3

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

    Range
    56711289..56792471
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038590904.1 → XP_038446832.1  dermatan-sulfate epimerase isoform X1

  2. XM_038590903.1 → XP_038446831.1  dermatan-sulfate epimerase isoform X1

  3. XM_038590902.1 → XP_038446830.1  dermatan-sulfate epimerase isoform X1

  4. XM_038590906.1 → XP_038446834.1  dermatan-sulfate epimerase isoform X2

  5. XM_038590907.1 → XP_038446835.1  dermatan-sulfate epimerase isoform X2

  6. XM_038590908.1 → XP_038446836.1  dermatan-sulfate epimerase isoform X3

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049222.1 Alternate UU_Cfam_GSD_1.0

    Range
    57340083..57421210
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038526611.1 → XP_038382539.1  dermatan-sulfate epimerase isoform X1

    UniProtKB/TrEMBL
    A0A8C0LA69, A0A8C0Q4B7, A0A8I3MZW8, A0A8P0T8V3

  2. XM_038526610.1 → XP_038382538.1  dermatan-sulfate epimerase isoform X1

    UniProtKB/TrEMBL
    A0A8C0LA69, A0A8C0Q4B7, A0A8I3MZW8, A0A8P0T8V3

  3. XM_038526609.1 → XP_038382537.1  dermatan-sulfate epimerase isoform X1

    UniProtKB/TrEMBL
    A0A8C0LA69, A0A8C0Q4B7, A0A8I3MZW8, A0A8P0T8V3

  4. XM_038526612.1 → XP_038382540.1  dermatan-sulfate epimerase isoform X2

  5. XM_038526613.1 → XP_038382541.1  dermatan-sulfate epimerase isoform X2

  6. XM_038526614.1 → XP_038382542.1  dermatan-sulfate epimerase isoform X3

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    57582066..57663169
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038538986.1 → XP_038394914.1  dermatan-sulfate epimerase isoform X1

    UniProtKB/TrEMBL
    A0A8C0LA69, A0A8C0Q4B7, A0A8I3MZW8, A0A8P0T8V3

  2. XM_533477.7 → XP_533477.2  dermatan-sulfate epimerase isoform X1

    UniProtKB/TrEMBL
    A0A8C0LA69, A0A8C0Q4B7, A0A8I3MZW8, A0A8P0T8V3

  3. XM_038538914.1 → XP_038394842.1  dermatan-sulfate epimerase isoform X1

    UniProtKB/TrEMBL
    A0A8C0LA69, A0A8C0Q4B7, A0A8I3MZW8, A0A8P0T8V3

  4. XM_022419122.2 → XP_022274830.1  dermatan-sulfate epimerase isoform X2

  5. XM_022419123.2 → XP_022274831.1  dermatan-sulfate epimerase isoform X2

  6. XM_038539209.1 → XP_038395137.1  dermatan-sulfate epimerase isoform X3

Nucleotide Protein
Heading Accession and Version

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