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SPAM1 sperm adhesion molecule 1 [ Canis lupus familiaris (dog) ]

Gene ID: 475211, updated on 17-Aug-2024

Summary

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Official Symbol
SPAM1provided by VGNC
Official Full Name
sperm adhesion molecule 1provided by VGNC
Primary source
VGNC:VGNC:46700
See related
Ensembl:ENSCAFG00845005894
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human all
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Genomic context

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See SPAM1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
4
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 14 NC_051818.1 (11482189..11500628, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 14 NC_006596.4 (11388764..11407202, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 14 NC_049235.1 (11650286..11668734, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 14 NC_049274.1 (11671617..11690064, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 14 NC_049755.1 (11409770..11428206, complement)

Chromosome 14 - NC_051818.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 229A Neighboring gene gametocyte-specific factor 1-like Neighboring gene hyaluronidase 4 Neighboring gene hyaluronidase-1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hyalurononglucosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fusion of sperm to egg plasma membrane involved in single fertilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hyaluronan catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in acrosomal vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hyaluronidase PH-20
XP_005628499.1
XP_038350267.1
XP_038350268.1
XP_038412566.1
XP_038412567.1
XP_038476495.1
XP_038476496.1
XP_038542186.1
XP_038542187.1
XP_532443.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051818.1 Reference ROS_Cfam_1.0

    Range
    11482189..11500628 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038686258.1 → XP_038542186.1  hyaluronidase PH-20

    UniProtKB/TrEMBL
    A0A8C0L733, A0A8C0MWX0, A0A8C0S4J6, A0A8I3MQH3
    Conserved Domains (1) summary
    pfam01630
    Location:42 → 370
    Glyco_hydro_56; Hyaluronidase

  2. XM_038686259.1 → XP_038542187.1  hyaluronidase PH-20

    UniProtKB/TrEMBL
    A0A8C0L733, A0A8C0MWX0, A0A8C0S4J6, A0A8I3MQH3
    Related
    ENSCAFP00845008100.1, ENSCAFT00845010423.1
    Conserved Domains (1) summary
    pfam01630
    Location:42 → 370
    Glyco_hydro_56; Hyaluronidase

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049274.1 Alternate UMICH_Zoey_3.1

    Range
    11671617..11690064 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038494339.1 → XP_038350267.1  hyaluronidase PH-20

    Conserved Domains (1) summary
    pfam01630
    Location:42 → 370
    Glyco_hydro_56; Hyaluronidase

  2. XM_038494340.1 → XP_038350268.1  hyaluronidase PH-20

    Conserved Domains (1) summary
    pfam01630
    Location:42 → 370
    Glyco_hydro_56; Hyaluronidase

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049755.1 Alternate UNSW_CanFamBas_1.0

    Range
    11409770..11428206 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038620567.1 → XP_038476495.1  hyaluronidase PH-20

  2. XM_038620568.1 → XP_038476496.1  hyaluronidase PH-20

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049235.1 Alternate UU_Cfam_GSD_1.0

    Range
    11650286..11668734 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038556638.1 → XP_038412566.1  hyaluronidase PH-20

    UniProtKB/TrEMBL
    A0A8C0L733, A0A8C0MWX0, A0A8C0S4J6, A0A8I3MQH3
    Conserved Domains (1) summary
    pfam01630
    Location:42 → 370
    Glyco_hydro_56; Hyaluronidase

  2. XM_038556639.1 → XP_038412567.1  hyaluronidase PH-20

    UniProtKB/TrEMBL
    A0A8C0L733, A0A8C0MWX0, A0A8C0S4J6, A0A8I3MQH3
    Conserved Domains (1) summary
    pfam01630
    Location:42 → 370
    Glyco_hydro_56; Hyaluronidase

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006596.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    11388764..11407202 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_532443.7 → XP_532443.1  hyaluronidase PH-20

    See identical proteins and their annotated locations for XP_532443.1

    UniProtKB/TrEMBL
    A0A8C0L733, A0A8C0MWX0, A0A8C0S4J6, A0A8I3MQH3
    Conserved Domains (1) summary
    pfam01630
    Location:42 → 370
    Glyco_hydro_56; Hyaluronidase

  2. XM_005628442.4 → XP_005628499.1  hyaluronidase PH-20

    See identical proteins and their annotated locations for XP_005628499.1

    UniProtKB/TrEMBL
    A0A8C0L733, A0A8C0MWX0, A0A8C0S4J6, A0A8I3MQH3
    Conserved Domains (1) summary
    pfam01630
    Location:42 → 370
    Glyco_hydro_56; Hyaluronidase
Nucleotide Protein
Heading Accession and Version

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