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TVAGG3_0104520 conserved oligomeric Golgi complex component 5 family [ Trichomonas vaginalis G3 ]

Gene ID: 4750090, updated on 17-May-2024

Summary

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Gene symbol
TVAGG3_0104520
Gene description
conserved oligomeric Golgi complex component 5 family
Locus tag
TVAGG3_0104520
See related
TrichDB:TVAGG3_0104520; VEuPathDB:TVAGG3_0104520
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Trichomonas vaginalis G3 (strain: G3, nat-host: Homo sapiens, culture-collection: ATCC:PRA-98)
Lineage
Eukaryota; Metamonada; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas
Old locus tag
TVAG_2v0104520
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Genomic context

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See TVAGG3_0104520 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
1
Sequence:
Chromosome: IV; NC_067206.1 (16199324..16200766)

Chromosome IV - NC_067206.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and SOCS box-containing protein 4 family Neighboring gene pseudo Neighboring gene spectrin binding Neighboring gene phospholipid-translocating ATPase protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067206.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis. Carlton JM, et al. Science, 2007 Jan 12. PMID 17218520, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex component 5 family
XP_001305309.1
  • Deepfry function prediction from predicted structure:protein binding protein;eggNOG seed ortholog:3218.PP1S145_28V6.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_067206.1 Reference assembly

    Range
    16199324..16200766
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001305308.1 → XP_001305309.1  conserved oligomeric Golgi complex component 5 family [Trichomonas vaginalis G3]

    See identical proteins and their annotated locations for XP_001305309.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A2FRT0
    Conserved Domains (1) summary
    pfam10392
    Location:40 → 128
    COG5; Golgi transport complex subunit 5
Nucleotide Protein
Heading Accession and Version

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