RPL10A ribosomal protein L10a [Canis lupus familiaris (dog)] - Gene

Summary

Official Symbol: RPL10Aprovided by VGNC
Official Full Name: ribosomal protein L10aprovided by VGNC
Primary source: VGNC:VGNC:105240
See related: Ensembl:ENSCAFG00845006364
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Canis lupus familiaris (sub-species: familiaris)
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 12

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
106	current	ROS_Cfam_1.0 (GCF_014441545.1)	12	NC_051816.1 (4939572..4941953)
106	current	Dog10K_Boxer_Tasha (GCF_000002285.5)	12	NC_006594.4 (4617249..4619630)
106	current	UU_Cfam_GSD_1.0 (GCF_011100685.1)	12	NC_049233.1 (4779297..4781678)
106	current	UMICH_Zoey_3.1 (GCF_005444595.1)	12	NC_049272.1 (4600335..4602715)
106	current	UNSW_CanFamBas_1.0 (GCF_013276365.1)	12	NC_049753.1 (4679124..4681505)

Chromosome 12 - NC_051816.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables RNA binding	IEA Inferred from Electronic Annotation more info	PubMed
enables structural constituent of ribosome	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in translation	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of large ribosomal subunit	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: large ribosomal subunit protein uL1

NP_001239074.1

EC 3.6.5.3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001252145.1 → NP_001239074.1 large ribosomal subunit protein uL1

See identical proteins and their annotated locations for NP_001239074.1

Status: VALIDATED

Source sequence(s)

GR887142

UniProtKB/TrEMBL

A0A8C0RKQ6, A0A8C0SRI0, A0A8I3MZL8

Related

ENSCAFP00845008812.1, ENSCAFT00845011294.1

Conserved Domains (1) summary

cl00322
Location:2 → 217

Ribosomal_L1; Ribosomal protein L1. The L1 protein, located near the E-site of the ribosome, forms part of the L1 stalk along with 23S rRNA. In bacteria and archaea, L1 functions both as a ribosomal protein that binds rRNA, and as a translation repressor that binds ...