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LMAN2L lectin, mannose binding 2 like [ Canis lupus familiaris (dog) ]

Gene ID: 474569, updated on 17-Aug-2024

Summary

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Official Symbol
LMAN2Lprovided by VGNC
Official Full Name
lectin, mannose binding 2 likeprovided by VGNC
Primary source
VGNC:VGNC:42709
See related
Ensembl:ENSCAFG00845023323
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See LMAN2L in Genome Data Viewer
Location:
chromosome: 10
Exon count:
9
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 10 NC_051814.1 (46091511..46121775)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 10 NC_006592.4 (45142064..45172145)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 10 NC_049231.1 (46272994..46303271)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 10 NC_049270.1 (45802629..45810509)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 10 NC_049751.1 (46089435..46119726)

Chromosome 10 - NC_051814.1Genomic Context describing neighboring genes Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 3 Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 4 Neighboring gene fer-1 like family member 5 Neighboring gene KAT8 regulatory NSL complex subunit 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
VIP36-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051814.1 Reference ROS_Cfam_1.0

    Range
    46091511..46121775
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038680437.1 → XP_038536365.1  VIP36-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0NFH7, A0A8I3PEN5
    Related
    ENSCAFP00845032290.1, ENSCAFT00845041198.1
    Conserved Domains (1) summary
    cl14058
    Location:50 → 309
    lectin_L-type; legume lectins

  2. XM_038680440.1 → XP_038536368.1  VIP36-like protein isoform X3

    Conserved Domains (1) summary
    cl14058
    Location:21 → 153
    lectin_L-type; legume lectins

  3. XM_038680438.1 → XP_038536366.1  VIP36-like protein isoform X2

    UniProtKB/TrEMBL
    A0A8C0LLY3, A0A8C0NR56, A0A8I3PJA0
    Related
    ENSCAFP00845032360.1, ENSCAFT00845041278.1
    Conserved Domains (1) summary
    cl14058
    Location:50 → 298
    lectin_L-type; legume lectins

  4. XM_038680439.1 → XP_038536367.1  VIP36-like protein isoform X3

    Conserved Domains (1) summary
    cl14058
    Location:21 → 153
    lectin_L-type; legume lectins

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049270.1 Alternate UMICH_Zoey_3.1

    Range
    45802629..45810509
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038489121.1 → XP_038345049.1  VIP36-like protein isoform X4

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049751.1 Alternate UNSW_CanFamBas_1.0

    Range
    46089435..46119726
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038615052.1 → XP_038470980.1  VIP36-like protein isoform X1

    Conserved Domains (1) summary
    cl14058
    Location:50 → 309
    lectin_L-type; legume lectins

  2. XM_038615055.1 → XP_038470983.1  VIP36-like protein isoform X3

    Conserved Domains (1) summary
    cl14058
    Location:21 → 153
    lectin_L-type; legume lectins

  3. XM_038615053.1 → XP_038470981.1  VIP36-like protein isoform X2

    Conserved Domains (1) summary
    cl14058
    Location:50 → 298
    lectin_L-type; legume lectins

  4. XM_038615054.1 → XP_038470982.1  VIP36-like protein isoform X3

    Conserved Domains (1) summary
    cl14058
    Location:21 → 153
    lectin_L-type; legume lectins

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049231.1 Alternate UU_Cfam_GSD_1.0

    Range
    46272994..46303271
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038551149.1 → XP_038407077.1  VIP36-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0NFH7, A0A8I3PEN5
    Conserved Domains (1) summary
    cl14058
    Location:50 → 309
    lectin_L-type; legume lectins

  2. XM_038551152.1 → XP_038407080.1  VIP36-like protein isoform X3

    Conserved Domains (1) summary
    cl14058
    Location:21 → 153
    lectin_L-type; legume lectins

  3. XM_038551150.1 → XP_038407078.1  VIP36-like protein isoform X2

    UniProtKB/TrEMBL
    A0A8C0LLY3, A0A8C0NR56, A0A8I3PJA0
    Conserved Domains (1) summary
    cl14058
    Location:50 → 298
    lectin_L-type; legume lectins

  4. XM_038551151.1 → XP_038407079.1  VIP36-like protein isoform X3

    Conserved Domains (1) summary
    cl14058
    Location:21 → 153
    lectin_L-type; legume lectins

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006592.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    45142064..45172145
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_531797.7 → XP_531797.4  VIP36-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0NFH7, A0A8I3PEN5
    Conserved Domains (1) summary
    cl14058
    Location:50 → 309
    lectin_L-type; legume lectins

  2. XM_022424659.2 → XP_022280367.1  VIP36-like protein isoform X3

    Conserved Domains (1) summary
    cl14058
    Location:21 → 153
    lectin_L-type; legume lectins

  3. XM_858841.6 → XP_863934.3  VIP36-like protein isoform X2

    UniProtKB/TrEMBL
    A0A8C0LLY3, A0A8C0NR56, A0A8I3PJA0
    Conserved Domains (1) summary
    cl14058
    Location:50 → 298
    lectin_L-type; legume lectins

  4. XM_022424658.2 → XP_022280366.1  VIP36-like protein isoform X3

    Conserved Domains (1) summary
    cl14058
    Location:21 → 153
    lectin_L-type; legume lectins
Nucleotide Protein
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