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TTTY3B testis expressed transcript, Y-linked 3B [ Homo sapiens (human) ]

Gene ID: 474148, updated on 17-Sep-2024

Summary

Official Symbol
TTTY3Bprovided by HGNC
Official Full Name
testis expressed transcript, Y-linked 3Bprovided by HGNC
Primary source
HGNC:HGNC:31888
See related
Ensembl:ENSG00000280961 AllianceGenome:HGNC:31888
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
NCRNA00122; LNCRNA00122
Summary
There are two copies of this gene within the P1 palindrome on chromosome Y. This record represents the more centromeric copy. [provided by RefSeq, Jul 2008]
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Genomic context

See TTTY3B in Genome Data Viewer
Location:
Yq11.23
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) Y NC_000024.10 (23936727..23941622, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) Y NC_060948.1 (24920947..24925842)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) Y NC_000024.9 (26082874..26087769, complement)

Chromosome Y - NC_000024.10Genomic Context describing neighboring genes Neighboring gene XK related, Y-linked pseudogene 4 Neighboring gene USP9Y pseudogene 13 Neighboring gene USP9Y pseudogene 11 Neighboring gene RNA, U1 small nuclear 86, pseudogene Neighboring gene USP9Y pseudogene 12

Genomic regions, transcripts, and products

General gene information

Markers

Other Names

  • long intergenic non-protein coding RNA 122
  • testis-specific transcript, Y-linked 3, centromeric
  • testis-specific transcript, Y-linked 3B (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002176.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC073893
    Related
    ENST00000631331.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000024.10 Reference GRCh38.p14 Primary Assembly

    Range
    23936727..23941622 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060948.1 Alternate T2T-CHM13v2.0

    Range
    24920947..24925842
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)