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PGK1 phosphoglycerate kinase 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 473678, updated on 17-Aug-2024

Summary

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Official Symbol
PGK1provided by VGNC
Official Full Name
phosphoglycerate kinase 1provided by VGNC
Primary source
VGNC:VGNC:1208
Locus tag
CK820_G0038214
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See PGK1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) X NC_072421.2 (75885653..75907675)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) X NC_072421.1 (75881742..75903764)

Chromosome X - NC_072421.2Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase subunit 7B Neighboring gene ATPase copper transporting alpha Neighboring gene phosphoglycerate mutase family member 4 Neighboring gene TATA-box binding protein associated factor 9b Neighboring gene cysteinyl leukotriene receptor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mapping of chimpanzee full-length cDNAs onto the human genome unveils large potential divergence of the transcriptome. Sakate R, et al. Gene, 2007 Sep 1. PMID 17574350
  2. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphoglycerate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gluconeogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphoglycerate kinase 1
NP_001129210.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001135738.1 → NP_001129210.1  phosphoglycerate kinase 1

    See identical proteins and their annotated locations for NP_001129210.1

    Status: PROVISIONAL

    Source sequence(s)
    AB222132
    UniProtKB/Swiss-Prot
    A5A6K4
    UniProtKB/TrEMBL
    A0A2I3TDJ0, A0A2J8KK16, K7CCI1
    Conserved Domains (1) summary
    PTZ00005
    Location:3 → 417
    PTZ00005; phosphoglycerate kinase; Provisional

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072421.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    75885653..75907675
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A5A6K4.1 GenPept UniProtKB/Swiss-Prot:A5A6K4

Gene LinkOut

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