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MED23 mediator complex subunit 23 [ Pan troglodytes (chimpanzee) ]

Gene ID: 472124, updated on 10-Oct-2024

Summary

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Official Symbol
MED23provided by VGNC
Official Full Name
mediator complex subunit 23provided by VGNC
Primary source
VGNC:VGNC:3487
Locus tag
CK820_G0000296
See related
Ensembl:ENSPTRG00000018601
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
CRSP3
Orthologs
human mouse all
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Genomic context

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See MED23 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
33
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 5 NC_072403.2 (143471800..143526879, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 6 NC_072404.1 (143483515..143525306, complement)

Chromosome 5 - NC_072403.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107975386 Neighboring gene uncharacterized LOC129144323 Neighboring gene arginase 1 Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 3 Neighboring gene large ribosomal subunit protein eL15-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 23
Names
cofactor required for Sp1 transcriptional activation, subunit 3, 130kDa
mediator complex subunit n23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072403.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    143471800..143526879 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063813496.1 → XP_063669566.1  mediator of RNA polymerase II transcription subunit 23 isoform X5

  2. XM_063813494.1 → XP_063669564.1  mediator of RNA polymerase II transcription subunit 23 isoform X3

    UniProtKB/TrEMBL
    A0A2I3T8G8, A0A2J8PT85, A0A6D2W9V8

  3. XM_063813495.1 → XP_063669565.1  mediator of RNA polymerase II transcription subunit 23 isoform X4

    UniProtKB/TrEMBL
    A0A2J8PT83

  4. XM_063813493.1 → XP_063669563.1  mediator of RNA polymerase II transcription subunit 23 isoform X1

    UniProtKB/TrEMBL
    A0A2I3RBW7

  5. XM_009452012.5 → XP_009450287.1  mediator of RNA polymerase II transcription subunit 23 isoform X2

    See identical proteins and their annotated locations for XP_009450287.1

    UniProtKB/TrEMBL
    A0A2J8PT78, A0A6D2WUB7, H2QZZ8, K7C3Q3
    Related
    ENSPTRP00000081810.1
    Conserved Domains (1) summary
    pfam11573
    Location:1 → 1307
    Med23; Mediator complex subunit 23

  6. XM_009452010.5 → XP_009450285.1  mediator of RNA polymerase II transcription subunit 23 isoform X8

    See identical proteins and their annotated locations for XP_009450285.1

    UniProtKB/TrEMBL
    A0A2J8PT77, A0A803KJB5, H2QZZ8, K7A6R6
    Related
    ENSPTRP00000085550.1
    Conserved Domains (1) summary
    pfam11573
    Location:1 → 1313
    Med23; Mediator complex subunit 23

  7. XM_063813497.1 → XP_063669567.1  mediator of RNA polymerase II transcription subunit 23 isoform X7

  8. XM_009452009.5 → XP_009450284.1  mediator of RNA polymerase II transcription subunit 23 isoform X6

    UniProtKB/TrEMBL
    H2QZZ8
    Conserved Domains (1) summary
    pfam11573
    Location:1 → 1265
    Med23; Mediator complex subunit 23

  9. XM_054686322.2 → XP_054542297.1  mediator of RNA polymerase II transcription subunit 23 isoform X9

  10. XM_009452013.5 → XP_009450288.1  mediator of RNA polymerase II transcription subunit 23 isoform X10

    UniProtKB/TrEMBL
    H2QZZ8
    Conserved Domains (1) summary
    pfam11573
    Location:1 → 1139
    Med23; Mediator complex subunit 23
Nucleotide Protein
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