U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GRSF1 G-rich RNA sequence binding factor 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 471208, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Official Symbol
GRSF1provided by VGNC
Official Full Name
G-rich RNA sequence binding factor 1provided by VGNC
Primary source
VGNC:VGNC:10865
Locus tag
CK820_G0003444
See related
Ensembl:ENSPTRG00000016136
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See GRSF1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 3 NC_072401.2 (59310392..59331131)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 4 NC_072402.1 (59310378..59331110)

Chromosome 3 - NC_072401.2Genomic Context describing neighboring genes Neighboring gene MOB kinase activator 1B Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA U13 Neighboring gene RUN and FYVE domain containing 3

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
G-rich sequence factor 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072401.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    59310392..59331131
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016951610.4 → XP_016807099.1  G-rich sequence factor 1 isoform X2

    UniProtKB/TrEMBL
    A0A2I3S1D6, A0A2J8PFB2, A0A8I3B119, K7BNB0, K7BWJ1
    Related
    ENSPTRP00000070757.1
    Conserved Domains (3) summary
    cd12505
    Location:250 → 323
    RRM2_GRSF1; RNA recognition motif 2 in G-rich sequence factor 1 (GRSF-1) and similar proteins
    cd12730
    Location:150 → 228
    RRM1_GRSF1; RNA recognition motif 1 in G-rich sequence factor 1 (GRSF-1) and similar proteins
    cd12733
    Location:402 → 476
    RRM3_GRSF1; RNA recognition motif 3 in G-rich sequence factor 1 (GRSF-1) and similar proteins

  2. XM_063809588.1 → XP_063665658.1  G-rich sequence factor 1 isoform X3

  3. XM_016951608.4 → XP_016807097.3  G-rich sequence factor 1 isoform X1

  4. XM_024356132.3 → XP_024211900.1  G-rich sequence factor 1 isoform X5

    UniProtKB/TrEMBL
    A0A2J8PFA9
    Conserved Domains (3) summary
    cd12505
    Location:131 → 204
    RRM2_GRSF1; RNA recognition motif 2 in G-rich sequence factor 1 (GRSF-1) and similar proteins
    cd12730
    Location:31 → 109
    RRM1_GRSF1; RNA recognition motif 1 in G-rich sequence factor 1 (GRSF-1) and similar proteins
    cd12733
    Location:283 → 357
    RRM3_GRSF1; RNA recognition motif 3 in G-rich sequence factor 1 (GRSF-1) and similar proteins

  5. XM_063809589.1 → XP_063665659.1  G-rich sequence factor 1 isoform X4

    UniProtKB/TrEMBL
    A0A2J8PF90
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.