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CPN2 carboxypeptidase N subunit 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 471043, updated on 17-Aug-2024

Summary

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Official Symbol
CPN2provided by VGNC
Official Full Name
carboxypeptidase N subunit 2provided by VGNC
Primary source
VGNC:VGNC:6176
Locus tag
CK820_G0023541
See related
Ensembl:ENSPTRG00000030017
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See CPN2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 2 NC_086015.1 (197527309..197537703, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 3 NC_072401.1 (197436686..197447079, complement)

Chromosome 2 - NC_086015.1Genomic Context describing neighboring genes Neighboring gene hes family bHLH transcription factor 1 Neighboring gene uncharacterized LOC100615125 Neighboring gene leucine rich repeat containing 15 Neighboring gene glycoprotein V platelet

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carboxypeptidase N subunit 2
Names
carboxypeptidase N, polypeptide 2, 83kD
XP_001162714.1
XP_009445319.1
XP_009445320.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_086015.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    197527309..197537703 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009447045.5 → XP_009445320.1  carboxypeptidase N subunit 2

    See identical proteins and their annotated locations for XP_009445320.1

    UniProtKB/TrEMBL
    A0A2J8M6D2, A0A6D2VVS4, H2R7V5
    Related
    ENSPTRP00000050882.1
    Conserved Domains (5) summary
    TIGR00864
    Location:371 → 439
    PCC; polycystin cation channel protein
    smart00013
    Location:21 → 53
    LRRNT; Leucine rich repeat N-terminal domain
    sd00031
    Location:387 → 399
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:123 → 146
    LRR_RI; leucine-rich repeat [structural motif]
    cl26018
    Location:126 → 380
    NEL; C-terminal novel E3 ligase, LRR-interacting

  2. XM_009447044.5 → XP_009445319.1  carboxypeptidase N subunit 2

    See identical proteins and their annotated locations for XP_009445319.1

    UniProtKB/TrEMBL
    A0A2J8M6D2, A0A6D2VVS4, H2R7V5
    Conserved Domains (5) summary
    TIGR00864
    Location:371 → 439
    PCC; polycystin cation channel protein
    smart00013
    Location:21 → 53
    LRRNT; Leucine rich repeat N-terminal domain
    sd00031
    Location:387 → 399
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:123 → 146
    LRR_RI; leucine-rich repeat [structural motif]
    cl26018
    Location:126 → 380
    NEL; C-terminal novel E3 ligase, LRR-interacting

  3. XM_001162714.6 → XP_001162714.1  carboxypeptidase N subunit 2

    See identical proteins and their annotated locations for XP_001162714.1

    UniProtKB/TrEMBL
    A0A2J8M6D2, A0A6D2VVS4, H2R7V5
    Conserved Domains (5) summary
    TIGR00864
    Location:371 → 439
    PCC; polycystin cation channel protein
    smart00013
    Location:21 → 53
    LRRNT; Leucine rich repeat N-terminal domain
    sd00031
    Location:387 → 399
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:123 → 146
    LRR_RI; leucine-rich repeat [structural motif]
    cl26018
    Location:126 → 380
    NEL; C-terminal novel E3 ligase, LRR-interacting
Nucleotide Protein
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