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MRPL47 mitochondrial ribosomal protein L47 [ Pan troglodytes (chimpanzee) ]

Gene ID: 471007, updated on 17-Aug-2024

Summary

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Official Symbol
MRPL47provided by VGNC
Official Full Name
mitochondrial ribosomal protein L47provided by VGNC
Primary source
VGNC:VGNC:2428
Locus tag
CK820_G0032051
See related
Ensembl:ENSPTRG00000015648
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See MRPL47 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 2 NC_086015.1 (182766087..182781928, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 3 NC_072401.1 (182675454..182691295, complement)

Chromosome 2 - NC_086015.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134809503 Neighboring gene actin like 6A Neighboring gene uncharacterized LOC134809504 Neighboring gene NADH:ubiquinone oxidoreductase subunit B5 Neighboring gene small nucleolar RNA U13 Neighboring gene zinc finger protein 277-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrial ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
39S ribosomal protein L47, mitochondrial; large ribosomal subunit protein uL29m

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_086015.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    182766087..182781928 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_526391.8 → XP_526391.3  large ribosomal subunit protein uL29m isoform X1

    See identical proteins and their annotated locations for XP_526391.3

    UniProtKB/TrEMBL
    A0A2J8L732, A0A2J8L736, A0A6D2YA77, H2QNS6
    Related
    ENSPTRP00000026929.3
    Conserved Domains (1) summary
    pfam06984
    Location:64 → 149
    MRP-L47; Mitochondrial 39-S ribosomal protein L47 (MRP-L47)

  2. XM_009446896.4 → XP_009445171.1  large ribosomal subunit protein uL29m isoform X2

    See identical proteins and their annotated locations for XP_009445171.1

    UniProtKB/TrEMBL
    A0A2J8L737
    Conserved Domains (1) summary
    cl09943
    Location:1 → 39
    Ribosomal_L29_HIP; Ribosomal L29 protein/HIP. L29 is a protein of the large ribosomal Subunit. A homolog, called heparin/heparan sulfate interacting protein (HIP), has also been identified in mammals. L29 is located on the surface of the large ribosomal subunit, where it ...
Nucleotide Protein
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