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ACLA_004120 integral membrane protein, Mpv17/PMP22 family, putative [ Aspergillus clavatus NRRL 1 ]

Gene ID: 4708351, updated on 31-Oct-2024

Summary

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Gene symbol
ACLA_004120
Gene description
integral membrane protein, Mpv17/PMP22 family, putative
Locus tag
ACLA_004120
See related
FungiDB:ACLA_004120; VEuPathDB:ACLA_004120
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus clavatus NRRL 1 (strain: NRRL 1, type-material: culture from type material of Aspergillus clavatus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Fumigati
Orthologs
Aspergillus fumigatus all
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Genomic context

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See ACLA_004120 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
5

NW_001517110.1Genomic Context describing neighboring genes Neighboring gene FAD binding domain protein Neighboring gene uncharacterized protein Neighboring gene MFS monosaccharide transporter, putative Neighboring gene plasma membrane ammonium transporter (Ato3), putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001517110.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus. Fedorova ND, et al. PLoS Genet, 2008 Apr 11. PMID 18404212, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integral membrane protein, Mpv17/PMP22 family, putative
XP_001276424.1
  • encoded by transcript ACLA_004120A
    predicted by EVM2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001517110.1 Reference assembly

    Range
    1056385..1057147
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001276423.1 → XP_001276424.1  integral membrane protein, Mpv17/PMP22 family, putative [Aspergillus clavatus NRRL 1]

    See identical proteins and their annotated locations for XP_001276424.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A1C5N0
    Conserved Domains (1) summary
    pfam04117
    Location:109 → 170
    Mpv17_PMP22; Mpv17 / PMP22 family
Nucleotide Protein
Heading Accession and Version

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