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ACLA_055880 Patatin-like serine hydrolase, putative [ Aspergillus clavatus NRRL 1 ]

Gene ID: 4707103, updated on 17-May-2024

Summary

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Gene symbol
ACLA_055880
Gene description
Patatin-like serine hydrolase, putative
Locus tag
ACLA_055880
See related
FungiDB:ACLA_055880; VEuPathDB:ACLA_055880
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus clavatus NRRL 1 (strain: NRRL 1, type-material: culture from type material of Aspergillus clavatus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Fumigati
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Genomic context

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See ACLA_055880 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
2

NW_001517105.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Viral A-type inclusion protein repeat protein Neighboring gene GNAT family acetyltransferase, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001517105.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus. Fedorova ND, et al. PLoS Genet, 2008 Apr 11. PMID 18404212, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysophospholipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylcholine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Patatin-like serine hydrolase, putative
XP_001274966.1
  • encoded by transcript ACLA_055880A
    predicted by EVM2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001517105.1 Reference assembly

    Range
    734323..738661 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001274965.1 → XP_001274966.1  Patatin-like serine hydrolase, putative [Aspergillus clavatus NRRL 1]

    See identical proteins and their annotated locations for XP_001274966.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    A1C9L6
    Conserved Domains (4) summary
    COG0664
    Location:751 → 864
    Crp; cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
    COG1752
    Location:1124 → 1394
    RssA; Predicted acylesterase/phospholipase RssA, containd patatin domain [General function prediction only]
    cd00038
    Location:749 → 850
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
    cl11396
    Location:1104 → 1372
    Patatin_and_cPLA2; Patatins and Phospholipases
Nucleotide Protein
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