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ACLA_016820 alpha-galactosidase, putative [ Aspergillus clavatus NRRL 1 ]

Gene ID: 4706882, updated on 17-May-2024

Summary

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Gene symbol
ACLA_016820
Gene description
alpha-galactosidase, putative
Locus tag
ACLA_016820
See related
FungiDB:ACLA_016820; VEuPathDB:ACLA_016820
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus clavatus NRRL 1 (strain: NRRL 1, type-material: culture from type material of Aspergillus clavatus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Fumigati
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Genomic context

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See ACLA_016820 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_001517104.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene DUF636 domain protein Neighboring gene uncharacterized protein Neighboring gene fungal chitosanase, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001517104.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus. Fedorova ND, et al. PLoS Genet, 2008 Apr 11. PMID 18404212, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-galactosidase, putative
XP_001274662.1
  • encoded by transcript ACLA_016820A
    predicted by EVM2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001517104.1 Reference assembly

    Range
    2340231..2341808
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001274661.1 → XP_001274662.1  alpha-galactosidase, putative [Aspergillus clavatus NRRL 1]

    See identical proteins and their annotated locations for XP_001274662.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    A1CBW8
    Conserved Domains (3) summary
    cd00161
    Location:413 → 498
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    cd14792
    Location:28 → 313
    GH27; glycosyl hydrolase family 27 (GH27)
    pfam00652
    Location:410 → 498
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A1CBW8.1

Gene LinkOut

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Molecular Biology Databases
Research Materials