U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ACLA_010730 oxidoreductase, short-chain dehydrogenase/reductase family [ Aspergillus clavatus NRRL 1 ]

Gene ID: 4706830, updated on 31-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
ACLA_010730
Gene description
oxidoreductase, short-chain dehydrogenase/reductase family
Locus tag
ACLA_010730
See related
FungiDB:ACLA_010730; VEuPathDB:ACLA_010730
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus clavatus NRRL 1 (strain: NRRL 1, type-material: culture from type material of Aspergillus clavatus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Fumigati
Orthologs
Aspergillus fumigatus all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ACLA_010730 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
6

NW_001517104.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene steroid monooxygenase (CpmA), putative

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_001517104.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus. Fedorova ND, et al. PLoS Genet, 2008 Apr 11. PMID 18404212, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 2,4-dienoyl-CoA reductase (NADPH) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
oxidoreductase, short-chain dehydrogenase/reductase family
XP_001274073.1
  • encoded by transcript ACLA_010730A
    predicted by EVM2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001517104.1 Reference assembly

    Range
    592267..593504 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001274072.1 → XP_001274073.1  oxidoreductase, short-chain dehydrogenase/reductase family [Aspergillus clavatus NRRL 1]

    See identical proteins and their annotated locations for XP_001274073.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A1CA79
    Conserved Domains (2) summary
    cd05369
    Location:18 → 282
    TER_DECR_SDR_a; Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR
    PRK07576
    Location:18 → 295
    PRK07576; short chain dehydrogenase; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials