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ACLA_089000 Fe superoxide dismutase, putative [ Aspergillus clavatus NRRL 1 ]

Gene ID: 4705239, updated on 31-Oct-2024

Summary

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Gene symbol
ACLA_089000
Gene description
Fe superoxide dismutase, putative
Locus tag
ACLA_089000
See related
FungiDB:ACLA_089000; VEuPathDB:ACLA_089000
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus clavatus NRRL 1 (strain: NRRL 1, type-material: culture from type material of Aspergillus clavatus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Fumigati
Orthologs
Aspergillus fumigatus all
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Genomic context

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See ACLA_089000 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
4

NW_001517101.1Genomic Context describing neighboring genes Neighboring gene GPI transamidase component PIG-S, putative Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001517101.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus. Fedorova ND, et al. PLoS Genet, 2008 Apr 11. PMID 18404212, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables superoxide dismutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in superoxide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Fe superoxide dismutase, putative
XP_001272635.1
  • encoded by transcript ACLA_089000A
    predicted by EVM2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001517101.1 Reference assembly

    Range
    295893..297028
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001272634.1 → XP_001272635.1  Fe superoxide dismutase, putative [Aspergillus clavatus NRRL 1]

    See identical proteins and their annotated locations for XP_001272635.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A1CEB0
    Conserved Domains (2) summary
    COG0605
    Location:45 → 281
    SodA; Superoxide dismutase [Inorganic ion transport and metabolism]
    pfam02777
    Location:132 → 272
    Sod_Fe_C; Iron/manganese superoxide dismutases, C-terminal domain
Nucleotide Protein
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