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ACLA_042100 extracellular endo-1,5-alpha-L-arabinase, putative [ Aspergillus clavatus NRRL 1 ]

Gene ID: 4702768, updated on 17-May-2024

Summary

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Gene symbol
ACLA_042100
Gene description
extracellular endo-1,5-alpha-L-arabinase, putative
Locus tag
ACLA_042100
See related
FungiDB:ACLA_042100; VEuPathDB:ACLA_042100
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus clavatus NRRL 1 (strain: NRRL 1, type-material: culture from type material of Aspergillus clavatus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Fumigati
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Genomic context

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See ACLA_042100 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
4

NW_001517097.1Genomic Context describing neighboring genes Neighboring gene fungal specific transcription factor domain protein Neighboring gene cytochrome P450 monooxygenase, putative Neighboring gene C4-dicarboxylate transporter/malic acid transport protein Neighboring gene F-box domain protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001517097.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus. Fedorova ND, et al. PLoS Genet, 2008 Apr 11. PMID 18404212, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arabinan endo-1,5-alpha-L-arabinosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
extracellular endo-1,5-alpha-L-arabinase, putative
XP_001271414.1
  • encoded by transcript ACLA_042100A
    predicted by EVM2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001517097.1 Reference assembly

    Range
    2593898..2595049
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001271413.1 → XP_001271414.1  extracellular endo-1,5-alpha-L-arabinase, putative [Aspergillus clavatus NRRL 1]

    See identical proteins and their annotated locations for XP_001271414.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    A1CLG4
    Conserved Domains (1) summary
    cd08998
    Location:32 → 321
    GH43_ABN_1; Glycosyl hydrolase family 43
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A1CLG4.1

Gene LinkOut

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Research Materials