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ACLA_096980 glycosyl hydrolase family 3 N terminal domain protein [ Aspergillus clavatus NRRL 1 ]

Gene ID: 4702262, updated on 17-May-2024

Summary

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Gene symbol
ACLA_096980
Gene description
glycosyl hydrolase family 3 N terminal domain protein
Locus tag
ACLA_096980
See related
FungiDB:ACLA_096980; VEuPathDB:ACLA_096980
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus clavatus NRRL 1 (strain: NRRL 1, type-material: culture from type material of Aspergillus clavatus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Fumigati
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Genomic context

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See ACLA_096980 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
4

NW_001517095.1Genomic Context describing neighboring genes Neighboring gene AMP dependent ligase Neighboring gene choline transport protein Neighboring gene IgE-binding protein, putative Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001517095.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus. Fedorova ND, et al. PLoS Genet, 2008 Apr 11. PMID 18404212, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucan catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycosyl hydrolase family 3 N terminal domain protein
XP_001270189.1
  • encoded by transcript ACLA_096980A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001517095.1 Reference assembly

    Range
    523882..527248
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001270188.1 → XP_001270189.1  glycosyl hydrolase family 3 N terminal domain protein [Aspergillus clavatus NRRL 1]

    See identical proteins and their annotated locations for XP_001270189.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    A1CMH6
    Conserved Domains (4) summary
    COG1472
    Location:281 → 627
    BglX; Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism]
    pfam01915
    Location:590 → 804
    Glyco_hydro_3_C; Glycosyl hydrolase family 3 C-terminal domain
    pfam14310
    Location:968 → 1040
    Fn3-like; Fibronectin type III-like domain
    cl07971
    Location:269 → 516
    Glyco_hydro_3; Glycosyl hydrolase family 3 N terminal domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A1CMH6.1

Gene LinkOut

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Molecular Biology Databases
Research Materials