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DTL denticleless E3 ubiquitin protein ligase homolog [ Pan troglodytes (chimpanzee) ]

Gene ID: 469674, updated on 17-Aug-2024

Summary

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Official Symbol
DTLprovided by VGNC
Official Full Name
denticleless E3 ubiquitin protein ligase homologprovided by VGNC
Primary source
VGNC:VGNC:6786
Locus tag
CK820_G0012694
See related
Ensembl:ENSPTRG00000001956
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See DTL in Genome Data Viewer
Location:
chromosome: 1
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (37006821..37075239, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (194248025..194316524)

Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107970095 Neighboring gene uncharacterized LOC104004711 Neighboring gene small nucleolar RNA SNORA26 Neighboring gene integrator complex subunit 7 Neighboring gene peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein-macromolecule adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitotic G2 DNA damage checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
denticleless protein homolog
Names
denticleless homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    37006821..37075239 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_525058.7 → XP_525058.3  denticleless protein homolog isoform X1

    See identical proteins and their annotated locations for XP_525058.3

    UniProtKB/TrEMBL
    A0A2I3REH1, A0A2I3SKD6, A0A2J8QVD4, A0A2J8QVE8, A0A6D2VUU3, A0A6D2X4N6
    Related
    ENSPTRP00000077486.1
    Conserved Domains (2) summary
    cd00200
    Location:55 → 389
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:55 → 96
    7WD40; WD40 repeat [structural motif]

  2. XM_063792405.1 → XP_063648475.1  denticleless protein homolog isoform X3

  3. XM_016938311.2 → XP_016793800.1  denticleless protein homolog isoform X2

    UniProtKB/TrEMBL
    A0A2I3REH1, A0A2J8QVD4, A0A6D2VUU3
Nucleotide Protein
Heading Accession and Version

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