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AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase [ Pan troglodytes (chimpanzee) ]

Gene ID: 469392, updated on 17-Aug-2024

Summary

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Official Symbol
AGLprovided by VGNC
Official Full Name
amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferaseprovided by VGNC
Primary source
VGNC:VGNC:35
Locus tag
CK820_G0020762
See related
Ensembl:ENSPTRG00000000997
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See AGL in Genome Data Viewer
Location:
chromosome: 1
Exon count:
35
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (131253628..131327538, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (99971751..100045656)

Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene solute carrier family 35 member A3 Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene large ribosomal subunit protein eL39-like Neighboring gene U4 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4-alpha-glucanotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables amylo-alpha-1,6-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycogen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogen debranching enzyme
Names
amylo-1, 6-glucosidase, 4-alpha-glucanotransferase (glycogen debranching enzyme, glycogen storage disease type III)
XP_001159306.1
XP_001159352.1
XP_001159400.1
XP_016778630.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    131253628..131327538 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016923141.4 → XP_016778630.1  glycogen debranching enzyme

    UniProtKB/TrEMBL
    A0A2I3SJ17, A0A2J8MHL2, A0A2J8MHL8, A0A6D2X043, A0A6D2XFR6, H2PZG8
    Conserved Domains (1) summary
    TIGR01531
    Location:22 → 1532
    glyc_debranch; glycogen debranching enzymye

  2. XM_001159352.6 → XP_001159352.1  glycogen debranching enzyme

    See identical proteins and their annotated locations for XP_001159352.1

    UniProtKB/TrEMBL
    A0A2I3SJ17, A0A2J8MHL2, A0A2J8MHL8, A0A6D2X043, A0A6D2XFR6, H2PZG8
    Conserved Domains (1) summary
    TIGR01531
    Location:22 → 1532
    glyc_debranch; glycogen debranching enzymye

  3. XM_001159400.7 → XP_001159400.1  glycogen debranching enzyme

    See identical proteins and their annotated locations for XP_001159400.1

    UniProtKB/TrEMBL
    A0A2I3SJ17, A0A2J8MHL2, A0A2J8MHL8, A0A6D2X043, A0A6D2XFR6, H2PZG8
    Related
    ENSPTRP00000001712.3
    Conserved Domains (1) summary
    TIGR01531
    Location:22 → 1532
    glyc_debranch; glycogen debranching enzymye

  4. XM_001159306.6 → XP_001159306.1  glycogen debranching enzyme

    See identical proteins and their annotated locations for XP_001159306.1

    UniProtKB/TrEMBL
    A0A2I3SJ17, A0A2J8MHL2, A0A2J8MHL8, A0A6D2X043, A0A6D2XFR6, H2PZG8
    Related
    ENSPTRP00000076483.1
    Conserved Domains (1) summary
    TIGR01531
    Location:22 → 1532
    glyc_debranch; glycogen debranching enzymye
Nucleotide Protein
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