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ZNF585A zinc finger protein 585A [ Pan troglodytes (chimpanzee) ]

Gene ID: 468846, updated on 17-Aug-2024

Summary

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Official Symbol
ZNF585Aprovided by VGNC
Official Full Name
zinc finger protein 585Aprovided by VGNC
Primary source
VGNC:VGNC:11504
Locus tag
CK820_G0030279
See related
Ensembl:ENSPTRG00000024056
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human all
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Genomic context

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See ZNF585A in Genome Data Viewer
Location:
chromosome: 20
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 20 NC_072418.2 (39499814..39524994)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 19 NC_072417.1 (39497998..39525021)

Chromosome 20 - NC_072418.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112206379 Neighboring gene zinc finger protein 383 Neighboring gene zinc finger protein 585B Neighboring gene zinc finger protein 420 Neighboring gene zinc finger protein 568 Neighboring gene zinc finger protein 829

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 585A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072418.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    39499814..39524994
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063801517.1 → XP_063657587.1  zinc finger protein 585A isoform X2

    UniProtKB/TrEMBL
    A0A2J8QHZ6

  2. XM_001163983.7 → XP_001163983.1  zinc finger protein 585A isoform X1

    See identical proteins and their annotated locations for XP_001163983.1

    UniProtKB/TrEMBL
    A0A2I3RAN8, A0A2J8QI30, A0A6D2X1G0
    Conserved Domains (4) summary
    smart00349
    Location:27 → 85
    KRAB; krueppel associated box
    COG5048
    Location:268 → 699
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:496 → 516
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:705 → 728
    zf-H2C2_2; Zinc-finger double domain

  3. XM_063801518.1 → XP_063657588.1  zinc finger protein 585A isoform X2

    UniProtKB/TrEMBL
    A0A2J8QHZ6

  4. XM_001163882.7 → XP_001163882.3  zinc finger protein 585A isoform X1

    See identical proteins and their annotated locations for XP_001163882.3

    UniProtKB/TrEMBL
    A0A2I3RAN8, A0A2J8QI30, A0A6D2X1G0
    Related
    ENSPTRP00000061534.1
    Conserved Domains (4) summary
    smart00349
    Location:27 → 85
    KRAB; krueppel associated box
    COG5048
    Location:268 → 699
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:496 → 516
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:705 → 728
    zf-H2C2_2; Zinc-finger double domain

  5. XM_016935761.4 → XP_016791250.1  zinc finger protein 585A isoform X1

    UniProtKB/TrEMBL
    A0A2I3RAN8, A0A2J8QI30, A0A6D2X1G0
    Conserved Domains (4) summary
    smart00349
    Location:27 → 85
    KRAB; krueppel associated box
    COG5048
    Location:268 → 699
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:496 → 516
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:705 → 728
    zf-H2C2_2; Zinc-finger double domain

  6. XM_016935762.4 → XP_016791251.1  zinc finger protein 585A isoform X2

    UniProtKB/TrEMBL
    A0A2J8QHZ6
    Related
    ENSPTRP00000018686.6
    Conserved Domains (4) summary
    COG5048
    Location:213 → 644
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:631 → 698
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:441 → 461
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl02581
    Location:1 → 30
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
Nucleotide Protein
Heading Accession and Version

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