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CDR2L cerebellar degeneration related protein 2 like [ Pan troglodytes (chimpanzee) ]

Gene ID: 468328, updated on 17-Aug-2024

Summary

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Official Symbol
CDR2Lprovided by VGNC
Official Full Name
cerebellar degeneration related protein 2 likeprovided by VGNC
Primary source
VGNC:VGNC:9414
Locus tag
CK820_G0039919
See related
Ensembl:ENSPTRG00000009626
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See CDR2L in Genome Data Viewer
Location:
chromosome: 19
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 19 NC_072417.2 (87981418..87999567)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 17 NC_072415.1 (86165859..86184009)

Chromosome 19 - NC_072417.2Genomic Context describing neighboring genes Neighboring gene otopetrin 3 Neighboring gene HID1 domain containing Neighboring gene mitochondrial ribosomal protein L58 Neighboring gene transfer RNA arginine (anticodon CCU)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
cerebellar degeneration-related protein 2-like
Names
paraneoplastic antigen

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072417.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    87981418..87999567
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_523717.8 → XP_523717.3  cerebellar degeneration-related protein 2-like isoform X1

    UniProtKB/TrEMBL
    A0A2J8KBR9, A0A6D2Y9T1, H2QDU1, K7AJR8, K7CRI1
    Related
    ENSPTRP00000016359.5
    Conserved Domains (1) summary
    cl25732
    Location:2 → 241
    SMC_N; RecF/RecN/SMC N terminal domain

  2. XM_009433252.4 → XP_009431527.2  cerebellar degeneration-related protein 2-like isoform X2

    UniProtKB/TrEMBL
    K7AJR8, K7CH47
    Conserved Domains (1) summary
    TIGR02168
    Location:23 → 225
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
Nucleotide Protein
Heading Accession and Version

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