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TNFAIP8L3 TNF alpha induced protein 8 like 3 [ Pan troglodytes (chimpanzee) ]

Gene ID: 467680, updated on 17-Aug-2024

Summary

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Official Symbol
TNFAIP8L3provided by VGNC
Official Full Name
TNF alpha induced protein 8 like 3provided by VGNC
Primary source
VGNC:VGNC:13472
Locus tag
CK820_G0008589
See related
Ensembl:ENSPTRG00000007073
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See TNFAIP8L3 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 16 NC_072414.2 (43056677..43104903, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 15 NC_072413.1 (43032175..43079769, complement)

Chromosome 16 - NC_072414.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107968623 Neighboring gene DDB1- and CUL4-associated factor 13-like Neighboring gene adaptor related protein complex 4 subunit epsilon 1 Neighboring gene cytochrome P450 family 19 subfamily A member 1 Neighboring gene uncharacterized LOC104002304 Neighboring gene uncharacterized LOC107968624

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tumor necrosis factor alpha-induced protein 8-like protein 3
Names
tumor necrosis factor, alpha-induced protein 8-like 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072414.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    43056677..43104903 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_523074.8 → XP_523074.4  tumor necrosis factor alpha-induced protein 8-like protein 3 isoform X2

    See identical proteins and their annotated locations for XP_523074.4

    UniProtKB/TrEMBL
    A0A2J8NSX7
    Conserved Domains (1) summary
    pfam05527
    Location:23 → 201
    DUF758; Domain of unknown function (DUF758)

  2. XM_063794950.1 → XP_063651020.1  tumor necrosis factor alpha-induced protein 8-like protein 3 isoform X1

  3. XM_016928238.4 → XP_016783727.1  tumor necrosis factor alpha-induced protein 8-like protein 3 isoform X3

    UniProtKB/TrEMBL
    A0A2J8NSX3, A0A6D2YB40, H2Q9F4
    Related
    ENSPTRP00000012090.3
    Conserved Domains (1) summary
    pfam05527
    Location:111 → 289
    DUF758; Domain of unknown function (DUF758)
Nucleotide Protein
Heading Accession and Version

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