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DLK1 delta like non-canonical Notch ligand 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 467556, updated on 17-Aug-2024

Summary

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Official Symbol
DLK1provided by VGNC
Official Full Name
delta like non-canonical Notch ligand 1provided by VGNC
Primary source
VGNC:VGNC:48895
Locus tag
CK820_G0024952
See related
Ensembl:ENSPTRG00000051401
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See DLK1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 15 NC_072413.2 (98734299..98742566)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 14 NC_072412.1 (92035718..92043977)

Chromosome 15 - NC_072413.2Genomic Context describing neighboring genes Neighboring gene basic proline-rich protein-like Neighboring gene uncharacterized LOC107968328 Neighboring gene uncharacterized LOC107968252 Neighboring gene microRNA mir-2392 Neighboring gene uncharacterized LOC743380 Neighboring gene uncharacterized LOC134808319 Neighboring gene microRNA mir-770

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein delta homolog 1
Names
delta-like 1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072413.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    98734299..98742566
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009428475.5 → XP_009426750.1  protein delta homolog 1

    See identical proteins and their annotated locations for XP_009426750.1

    UniProtKB/TrEMBL
    A0A2I3RTL1, A0A2J8QLV8, A0A2J8QLW6, A0A6D2VUR3, A0A6D2WDT7, H2RDH4
    Related
    ENSPTRP00000080331.1
    Conserved Domains (1) summary
    cd00054
    Location:175 → 205
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials