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NAP1L3 nucleosome assembly protein 1 like 3 [ Homo sapiens (human) ]

Gene ID: 4675, updated on 2-Nov-2024

Summary

Official Symbol
NAP1L3provided by HGNC
Official Full Name
nucleosome assembly protein 1 like 3provided by HGNC
Primary source
HGNC:HGNC:7639
See related
Ensembl:ENSG00000186310 MIM:300117; AllianceGenome:HGNC:7639
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MB20; NPL3
Summary
This gene is intronless and encodes a member of the nucleosome assembly protein (NAP) family. This gene is linked closely to a region of genes responsible for several X-linked cognitive disability syndromes. [provided by RefSeq, Dec 2010]
Orthologs
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Genomic context

See NAP1L3 in Genome Data Viewer
Location:
Xq21.32
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (93670930..93673578, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (92116100..92118747, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (92925929..92928577, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene NT5DC1 pseudogene 1 Neighboring gene NANOG hESC enhancer GRCh37_chrX:92807667-92808410 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chrX:92840114-92841313 Neighboring gene ribosomal protein L7 pseudogene 55 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:92882347-92882848 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:92891704-92892690 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:92892691-92893676 Neighboring gene family with sequence similarity 133 member A Neighboring gene USP37 pseudogene 1

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • MGC26312

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables chromatin binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables histone binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in nucleosome assembly IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in chromatin IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
nucleosome assembly protein 1-like 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_013275.1 RefSeqGene

    Range
    5032..7680
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_004538.6NP_004529.2  nucleosome assembly protein 1-like 3

    See identical proteins and their annotated locations for NP_004529.2

    Status: REVIEWED

    Source sequence(s)
    AA463251, AK315176, BC034954, DA294849, DA486883
    Consensus CDS
    CCDS14465.1
    UniProtKB/Swiss-Prot
    B2RCM0, O60788, Q99457
    UniProtKB/TrEMBL
    V9GYL6
    Related
    ENSP00000362171.3, ENST00000373079.4
    Conserved Domains (1) summary
    pfam00956
    Location:314486
    NAP; Nucleosome assembly protein (NAP)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    93670930..93673578 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    92116100..92118747 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)