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NUBPL NUBP iron-sulfur cluster assembly factor, mitochondrial [ Pan troglodytes (chimpanzee) ]

Gene ID: 467418, updated on 17-Aug-2024

Summary

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Official Symbol
NUBPLprovided by VGNC
Official Full Name
NUBP iron-sulfur cluster assembly factor, mitochondrialprovided by VGNC
Primary source
VGNC:VGNC:8355
Locus tag
CK820_G0029815
See related
Ensembl:ENSPTRG00000006245
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See NUBPL in Genome Data Viewer
Location:
chromosome: 15
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 15 NC_072413.2 (29814836..30104873)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 14 NC_072412.1 (23054629..23344677)

Chromosome 15 - NC_072413.2Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 33 Neighboring gene uncharacterized LOC107968139 Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC107968140 Neighboring gene Rho GTPase activating protein 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent FeS chaperone activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in iron-sulfur cluster assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial respiratory chain complex I assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
iron-sulfur protein NUBPL; iron-sulfur cluster transfer protein NUBPL
Names
nucleotide binding protein like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072413.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    29814836..30104873
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_522815.7 → XP_522815.2  iron-sulfur cluster transfer protein NUBPL isoform X1

    See identical proteins and their annotated locations for XP_522815.2

    UniProtKB/TrEMBL
    A0A2J8QL51, A0A6D2XGB2, H2R457
    Related
    ENSPTRP00000046619.4
    Conserved Domains (1) summary
    pfam10609
    Location:65 → 311
    ParA; NUBPL iron-transfer P-loop NTPase

  2. XM_009427629.4 → XP_009425904.1  iron-sulfur cluster transfer protein NUBPL isoform X2

    Conserved Domains (1) summary
    pfam10609
    Location:65 → 273
    ParA; NUBPL iron-transfer P-loop NTPase

  3. XM_016925967.3 → XP_016781456.1  iron-sulfur cluster transfer protein NUBPL isoform X3

  4. XM_054666450.2 → XP_054522425.1  iron-sulfur cluster transfer protein NUBPL isoform X4

  5. XM_016925968.3 → XP_016781457.1  iron-sulfur cluster transfer protein NUBPL isoform X5

  6. XM_063792828.1 → XP_063648898.1  iron-sulfur cluster transfer protein NUBPL isoform X8

  7. XM_063792829.1 → XP_063648899.1  iron-sulfur cluster transfer protein NUBPL isoform X9

  8. XM_063792827.1 → XP_063648897.1  iron-sulfur cluster transfer protein NUBPL isoform X8

  9. XM_003314292.6 → XP_003314340.1  iron-sulfur cluster transfer protein NUBPL isoform X6

    See identical proteins and their annotated locations for XP_003314340.1

    Conserved Domains (1) summary
    pfam10609
    Location:3 → 215
    ParA; NUBPL iron-transfer P-loop NTPase

  10. XM_009427630.5 → XP_009425905.1  iron-sulfur cluster transfer protein NUBPL isoform X9

    See identical proteins and their annotated locations for XP_009425905.1

    Conserved Domains (1) summary
    cl38936
    Location:1 → 128
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  11. XM_063792826.1 → XP_063648896.1  iron-sulfur cluster transfer protein NUBPL isoform X7

  12. XM_016925970.4 → XP_016781459.1  iron-sulfur cluster transfer protein NUBPL isoform X9

    Conserved Domains (1) summary
    cl38936
    Location:1 → 128
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  13. XM_009427631.5 → XP_009425906.1  iron-sulfur cluster transfer protein NUBPL isoform X9

    See identical proteins and their annotated locations for XP_009425906.1

    Conserved Domains (1) summary
    cl38936
    Location:1 → 128
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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